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    tepsin TEPSIN adaptor related protein complex 4 accessory protein [ Danio rerio (zebrafish) ]

    Gene ID: 100148088, updated on 27-Mar-2024

    Summary

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    Official Symbol
    tepsinprovided by ZNC
    Official Full Name
    TEPSIN adaptor related protein complex 4 accessory proteinprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-100716-1
    See related
    Ensembl:ENSDARG00000071406 AllianceGenome:ZFIN:ZDB-GENE-100716-1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    enthd2; gb:cr928902
    Summary
    Orthologous to human TEPSIN (TEPSIN adaptor related protein complex 4 accessory protein). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (34827535..34842348)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (34726685..34742005)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 38 member 10 Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 8 Neighboring gene si:dkey-21c1.1 Neighboring gene si:dkey-21c1.4 Neighboring gene BICRA like chromatin remodeling complex associated protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Lo J, et al. Genome Res, 2003 Mar. PMID 12618376, Free PMC Article
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    4. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    AP-4 complex accessory subunit tepsin
    Names
    ENTH domain containing 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      34827535..34842348
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001919649.5 → XP_001919684.2  AP-4 complex accessory subunit tepsin

      UniProtKB/TrEMBL
      A0A8M1QH98, E7F390
      Related
      ENSDARP00000096307.3, ENSDART00000105533.5
      Conserved Domains (1) summary
      cd03572
      Location:12 → 133
      ENTH_epsin_related; ENTH domain, Epsin Related family; composed of hypothetical proteins containing an ENTH-like domain. The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in ...
    Nucleotide Protein Strain
    Heading Accession and Version

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