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    rpl3 ribosomal protein L3 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100145083, updated on 8-Mar-2024

    Summary

    Official Symbol
    rpl3provided by Xenbase
    Official Full Name
    ribosomal protein L3provided by Xenbase
    Primary source
    Xenbase:XB-GENE-971703
    See related
    Ensembl:ENSXETG00000006914
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    NEW
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (120831778..120837676, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (110430731..110436605, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene chromobox 7 Neighboring gene platelet derived growth factor subunit B Neighboring gene small nucleolar RNA U83B Neighboring gene synaptogyrin 1 Neighboring gene TGF-beta activated kinase 1/MAP3K7 binding protein 1

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    large ribosomal subunit protein uL3
    NP_001120075.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126603.1NP_001120075.1  large ribosomal subunit protein uL3

      See identical proteins and their annotated locations for NP_001120075.1

      Status: PROVISIONAL

      Source sequence(s)
      BC158513
      UniProtKB/TrEMBL
      A0A6I8R944, B0BM43, F6XM15
      Related
      ENSXETP00000015108.3, ENSXETT00000015108.5
      Conserved Domains (1) summary
      PTZ00103
      Location:1400
      PTZ00103; 60S ribosomal protein L3; Provisional

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      120831778..120837676 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)