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    rhd Rh blood group D antigen [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100038092, updated on 7-Sep-2023

    Summary

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    Official Symbol
    rhdprovided by Xenbase
    Official Full Name
    Rh blood group D antigenprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-486532
    See related
    Ensembl:ENSXETG00000003690
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    rh4; rh30; rhce; rhii; rhpi; diiic; rhced; rhdcw; rhdel; rhpii; cd240d; rhxiii; rhdva(tt); rhk562-ii
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (89596998..89621155)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (85484069..85508386)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene low density lipoprotein receptor adaptor protein 1 Neighboring gene macoilin 1 Neighboring gene transmembrane protein 50A Neighboring gene provisional ortholog of microsomal glutathione S-transferase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary conservation and diversification of Rh family genes and proteins. Huang CH, et al. Proc Natl Acad Sci U S A, 2005 Oct 25. PMID 16227429, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ammonium transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within ammonium transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: RH-like protein
    Names
    Rh blood group, CcEe antigens

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      89596998..89621155
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002936599.5 → XP_002936645.3  LOW QUALITY PROTEIN: RH-like protein

      UniProtKB/TrEMBL
      A0A8J0QSD5, F7AH08
      Related
      ENSXETP00000007967.4, ENSXETT00000007967.5
    Nucleotide Protein Strain
    Heading Accession and Version

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