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    FAM20B family with sequence similarity 20, member B [ Homo sapiens (human) ]

    Gene ID: 9917, updated on 27-Jun-2015
    Official Symbol
    FAM20Bprovided by HGNC
    Official Full Name
    family with sequence similarity 20, member Bprovided by HGNC
    Primary source
    HGNC:HGNC:23017
    See related
    Ensembl:ENSG00000116199; HPRD:13297; MIM:611063; Vega:OTTHUMG00000035073
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    gxk1
    Orthologs
    See FAM20B in Epigenomics, MapViewer
    Location:
    1q25
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    107 current GRCh38.p2 (GCF_000001405.28) 1 NC_000001.11 (179025809..179076567)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (178994939..179045702)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene Ral GEF with PH domain and SH3 binding motif 2 Neighboring gene angiopoietin-like 1 Neighboring gene uncharacterized LOC102724754 Neighboring gene ribosomal protein S26 pseudogene 16 Neighboring gene torsin family 3, member A Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene SET pseudogene 10

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    phosphotransferase activity, alcohol group as acceptor IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of protein targeting to mitochondrion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    nucleoplasm IDA
    Inferred from Direct Assay
    more info
     
    Preferred Names
    glycosaminoglycan xylosylkinase
    Names
    glycosaminoglycan xylosylkinase
    xylose kinase
    NP_055679.1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_014864.3NP_055679.1  glycosaminoglycan xylosylkinase

      See identical proteins and their annotated locations for NP_055679.1

      Status: VALIDATED

      Source sequence(s)
      AL139132, BC051794, CA844342
      Consensus CDS
      CCDS1328.1
      UniProtKB/TrEMBL
      A0A024R918
      UniProtKB/Swiss-Prot
      O75063
      Related
      ENSP00000263733, OTTHUMP00000033047, ENST00000263733, OTTHUMT00000084922
      Conserved Domains (1) summary
      cd10470
      Location:188394
      FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p2 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p2 Primary Assembly

      Range
      179025809..179076567
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011510225.1XP_011508527.1  

      See identical proteins and their annotated locations for XP_011508527.1

      Conserved Domains (1) summary
      cd10470
      Location:188394
      FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase
    2. XM_011510224.1XP_011508526.1  

      See identical proteins and their annotated locations for XP_011508526.1

      Conserved Domains (1) summary
      cd10470
      Location:188394
      FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase
    3. XM_011510226.1XP_011508528.1  

      Conserved Domains (1) summary
      cd10470
      Location:88294
      FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

    Alternate CHM1_1.1

    Genomic

    1. NC_018912.2 Alternate CHM1_1.1

      Range
      180418783..180469380
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)