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    Tbccd1 TBCC domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 70573, updated on 26-Jun-2015
    Official Symbol
    Tbccd1provided by MGI
    Official Full Name
    TBCC domain containing 1provided by MGI
    Primary source
    MGI:MGI:1917823
    See related
    Ensembl:ENSMUSG00000004462
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AU015083; BB165076; 5730478M09Rik
    Orthologs
    See Tbccd1 in Epigenomics, MapViewer
    Location:
    16; 16 B1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    105 current GRCm38.p3 (GCF_000001635.23) 16 NC_000082.6 (22813215..22857701, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (22813288..22857642, complement)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene ribosomal protein SA pseudogene Neighboring gene predicted gene, 30416 Neighboring gene crystallin, gamma S Neighboring gene DnaJ (Hsp40) homolog, subfamily B, member 11 Neighboring gene predicted gene, 30505 Neighboring gene predicted gene, 30611 Neighboring gene alpha-2-HS-glycoprotein

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    cell morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
     
    maintenance of Golgi location ISO
    Inferred from Sequence Orthology
    more info
     
    maintenance of centrosome location ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of cell migration ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of cell shape ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    spindle pole centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    TBCC domain-containing protein 1
    Names
    TBCC domain-containing protein 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081368.1NP_001074837.1  TBCC domain-containing protein 1

      See identical proteins and their annotated locations for NP_001074837.1

      Status: VALIDATED

      Source sequence(s)
      BC082558, CF749564
      Consensus CDS
      CCDS49798.1
      UniProtKB/Swiss-Prot
      Q640P7
      Related
      ENSMUSP00000004576, ENSMUST00000004576
      Conserved Domains (2) summary
      smart00673
      Location:337374
      CARP; Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product
      pfam07986
      Location:329444
      TBCC; Tubulin binding cofactor C

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p3 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p3 C57BL/6J

      Range
      22813215..22857701
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006522565.2XP_006522628.1  

      Conserved Domains (2) summary
      smart00673
      Location:370407
      CARP; Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product
      pfam07986
      Location:362477
      TBCC; Tubulin binding cofactor C
    2. XM_006522567.2XP_006522630.1  

      See identical proteins and their annotated locations for XP_006522630.1

      UniProtKB/Swiss-Prot
      Q640P7
      Conserved Domains (2) summary
      smart00673
      Location:337374
      CARP; Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product
      pfam07986
      Location:329444
      TBCC; Tubulin binding cofactor C
    3. XM_006522566.2XP_006522629.1  

      Conserved Domains (2) summary
      smart00673
      Location:360397
      CARP; Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product
      pfam07986
      Location:352467
      TBCC; Tubulin binding cofactor C
    4. XM_006522568.2XP_006522631.1  

      See identical proteins and their annotated locations for XP_006522631.1

      UniProtKB/Swiss-Prot
      Q640P7
      Conserved Domains (2) summary
      smart00673
      Location:337374
      CARP; Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product
      pfam07986
      Location:329444
      TBCC; Tubulin binding cofactor C
    5. XM_006522564.1XP_006522627.1  

      Conserved Domains (2) summary
      smart00673
      Location:382419
      CARP; Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product
      pfam07986
      Location:374489
      TBCC; Tubulin binding cofactor C
    6. XM_011246010.1XP_011244312.1  

    7. XM_006522569.1XP_006522632.1  

    RNA

    1. XR_384598.2 RNA Sequence

    Alternate Mm_Celera

    Genomic

    1. AC_000038.1 Alternate Mm_Celera

      Range
      23373540..23417893
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)