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    Snx15 sorting nexin 15 [ Mus musculus (house mouse) ]

    Gene ID: 69024, updated on 26-Jun-2015
    Official Symbol
    Snx15provided by MGI
    Official Full Name
    sorting nexin 15provided by MGI
    Primary source
    MGI:MGI:1916274
    See related
    Ensembl:ENSMUSG00000024787; Vega:OTTMUSG00000034056
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1500032B08Rik; E130013C21Rik
    Orthologs
    See Snx15 in Epigenomics, MapViewer
    Location:
    19; 19 A
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    105 current GRCm38.p3 (GCF_000001635.23) 19 NC_000085.6 (6119399..6133783, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (6119404..6128215, complement)

    Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene N-acetylated alpha-linked acidic dipeptidase-like 1 Neighboring gene SAC3 domain containing 1 Neighboring gene predicted gene, 31978 Neighboring gene ADP-ribosylation factor-like 2 Neighboring gene predicted pseudogene 5510

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    molecular_function ND
    No biological Data available
    more info
     
    phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    sorting nexin-15
    Names
    sorting nexin-15

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026912.1NP_081188.1  sorting nexin-15

      See identical proteins and their annotated locations for NP_081188.1

      Status: PROVISIONAL

      Source sequence(s)
      BC016091
      Consensus CDS
      CCDS29495.1
      UniProtKB/Swiss-Prot
      Q91WE1
      Related
      ENSMUSP00000025702, OTTMUSP00000046522, ENSMUST00000025702, OTTMUST00000086014
      Conserved Domains (2) summary
      cd02677
      Location:267337
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cl02563
      Location:9126
      PX_domain; The Phox Homology domain, a phosphoinositide binding module

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p3 C57BL/6J

    Genomic

    1. NC_000085.6 Reference GRCm38.p3 C57BL/6J

      Range
      6119399..6133783
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006531832.2XP_006531895.1  

      See identical proteins and their annotated locations for XP_006531895.1

      UniProtKB/Swiss-Prot
      Q91WE1
      Conserved Domains (2) summary
      cd02677
      Location:267337
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cl02563
      Location:9126
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
    2. XM_011248650.1XP_011246952.1  

      Conserved Domains (2) summary
      cd02677
      Location:255325
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cl02563
      Location:9114
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
    3. XM_006531831.2XP_006531894.1  

      See identical proteins and their annotated locations for XP_006531894.1

      UniProtKB/Swiss-Prot
      Q91WE1
      Conserved Domains (2) summary
      cd02677
      Location:267337
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cl02563
      Location:9126
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
    4. XM_011248649.1XP_011246951.1  

      See identical proteins and their annotated locations for XP_011246951.1

      Conserved Domains (2) summary
      cd02677
      Location:267337
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cl02563
      Location:9126
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
    5. XM_011248647.1XP_011246949.1  

      See identical proteins and their annotated locations for XP_011246949.1

      Conserved Domains (2) summary
      cd02677
      Location:267337
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cl02563
      Location:9126
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
    6. XM_011248648.1XP_011246950.1  

      See identical proteins and their annotated locations for XP_011246950.1

      Conserved Domains (2) summary
      cd02677
      Location:267337
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cl02563
      Location:9126
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
    7. XM_011248651.1XP_011246953.1  

      Conserved Domains (1) summary
      cl02563
      Location:9126
      PX_domain; The Phox Homology domain, a phosphoinositide binding module

    Alternate Mm_Celera

    Genomic

    1. AC_000041.1 Alternate Mm_Celera

      Range
      5991944..6000755
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)