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    rnf144aa ring finger protein 144aa [ Danio rerio (zebrafish) ]

    Gene ID: 570968, updated on 26-Jun-2015
    Official Symbol
    rnf144aaprovided by ZNC
    Official Full Name
    ring finger protein 144aaprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041001-88
    See related
    Ensembl:ENSDARG00000020600; Vega:OTTDARG00000004256
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    si:ch211-276e8.1
    See rnf144aa in MapViewer
    Location:
    chromosome: 17
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current GRCz10 (GCF_000002035.5) 17 NC_007128.6 (35338749..35404654, complement)
    103 previous assembly Zv9 (GCF_000002035.4) 17 NC_007128.5 (35453850..35519771, complement)

    Chromosome 17 - NC_007128.6Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 17a Neighboring gene isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) Neighboring gene radical S-adenosyl methionine domain containing 2 Neighboring gene cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    coenzyme F420-0 gamma-glutamyl ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    coenzyme F420-2 alpha-glutamyl ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein-glutamic acid ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein-glycine ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein-glycine ligase activity, elongating IEA
    Inferred from Electronic Annotation
    more info
     
    protein-glycine ligase activity, initiating IEA
    Inferred from Electronic Annotation
    more info
     
    ribosomal S6-glutamic acid ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    tubulin-glutamic acid ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    tubulin-glycine ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    probable E3 ubiquitin-protein ligase RNF144A-A
    Names
    probable E3 ubiquitin-protein ligase RNF144A-A
    RING finger protein 144A-A
    NP_001038674.1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001045209.2NP_001038674.1  probable E3 ubiquitin-protein ligase RNF144A-A

      See identical proteins and their annotated locations for NP_001038674.1

      Status: PROVISIONAL

      Source sequence(s)
      BX571665, CR556709
      UniProtKB/Swiss-Prot
      Q5RFV4
      Conserved Domains (1) summary
      smart00647
      Location:91156
      IBR; In Between Ring fingers

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz10 Primary Assembly

    Genomic

    1. NC_007128.6 Reference GRCz10 Primary Assembly

      Range
      35338749..35404654
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005158736.2XP_005158793.1  

      See identical proteins and their annotated locations for XP_005158793.1

      UniProtKB/Swiss-Prot
      Q5RFV4
      Related
      ENSDARP00000017882, OTTDARP00000004065, ENSDART00000016053, OTTDART00000004474
      Conserved Domains (1) summary
      smart00647
      Location:91156
      IBR; In Between Ring fingers