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    cmklr1 chemokine-like receptor 1 [ Danio rerio (zebrafish) ]

    Gene ID: 557341, updated on 26-Jun-2015
    Official Symbol
    cmklr1provided by ZNC
    Official Full Name
    chemokine-like receptor 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060526-126
    See related
    Ensembl:ENSDARG00000090890; Vega:OTTDARG00000018782
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    si:ch211-240b21.3
    See cmklr1 in MapViewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current GRCz10 (GCF_000002035.5) 5 NC_007116.6 (20066784..20089154)
    103 previous assembly Zv9 (GCF_000002035.4) 5 NC_007116.5 (22353912..22374840)

    Chromosome 5 - NC_007116.6Genomic Context describing neighboring genes Neighboring gene squamous cell carcinoma antigen recognized by T cells 3 Neighboring gene FIC domain containing Neighboring gene uncharacterized LOC795147 Neighboring gene si:ch211-240b21.4 Neighboring gene si:ch211-240b21.5

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    G-protein coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    G-protein coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    signal transducer activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    G-protein coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    chemokine-like receptor 1
    Names
    chemokine-like receptor 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001082812.2NP_001076281.1  chemokine-like receptor 1

      See identical proteins and their annotated locations for NP_001076281.1

      Status: PROVISIONAL

      Source sequence(s)
      BC134147
      UniProtKB/TrEMBL
      A2BGL6
      Related
      ENSDARP00000123534, OTTDARP00000019099, ENSDART00000137019, OTTDART00000022875
      Conserved Domains (1) summary
      pfam00001
      Location:79305
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz10 Primary Assembly

    Genomic

    1. NC_007116.6 Reference GRCz10 Primary Assembly

      Range
      20066784..20089154
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005165150.2XP_005165207.1  

      See identical proteins and their annotated locations for XP_005165207.1

      UniProtKB/TrEMBL
      A2BGL6
      Conserved Domains (1) summary
      pfam00001
      Location:79305
      7tm_1; 7 transmembrane receptor (rhodopsin family)