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    zgc:112416 zgc:112416 [ Danio rerio (zebrafish) ]

    Gene ID: 550509, updated on 26-Jun-2015
    Official Symbol
    zgc:112416provided by ZNC
    Official Full Name
    zgc:112416provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050417-347
    See related
    Ensembl:ENSDARG00000044549; Vega:OTTDARG00000038056
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    See zgc:112416 in MapViewer
    Location:
    chromosome: 6
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current GRCz10 (GCF_000002035.5) 6 NC_007117.6 (11133708..11161002)
    103 previous assembly Zv9 (GCF_000002035.4) 6 NC_007117.5 (11280082..11307376)

    Chromosome 6 - NC_007117.6Genomic Context describing neighboring genes Neighboring gene ATG9 autophagy related 9 homolog A (S. cerevisiae) Neighboring gene pericentrin Neighboring gene SUMO1/sentrin/SMT3 specific peptidase 2 Neighboring gene deafness, autosomal recessive 59

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    Preferred Names
    uncharacterized protein LOC550509
    Names
    uncharacterized protein LOC550509

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017811.1NP_001017811.1  uncharacterized protein LOC550509

      See identical proteins and their annotated locations for NP_001017811.1

      Status: PREDICTED

      Source sequence(s)
      BC093292
      UniProtKB/TrEMBL
      Q566X1
      Related
      ENSDARP00000125904, OTTDARP00000042805, ENSDART00000151260, OTTDART00000054491
      Conserved Domains (1) summary
      pfam15248
      Location:143215
      DUF4587; Domain of unknown function (DUF4587)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz10 Primary Assembly

    Genomic

    1. NC_007117.6 Reference GRCz10 Primary Assembly

      Range
      11133708..11161002
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005165769.2XP_005165826.1  

      Conserved Domains (1) summary
      pfam15248
      Location:111183
      DUF4587; Domain of unknown function (DUF4587)