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    anks6 ankyrin repeat and sterile alpha motif domain containing 6 [ Danio rerio (zebrafish) ]

    Gene ID: 449657, updated on 26-Jun-2015
    Official Symbol
    anks6provided by ZNC
    Official Full Name
    ankyrin repeat and sterile alpha motif domain containing 6provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041010-213
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:85964
    Annotation information
    Annotation category: partial on reference assembly
    See anks6 in MapViewer
    Location:
    chromosome: 24
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    104 current GRCz10 (GCF_000002035.5) Unplaced Scaffold NW_003336693.1 (2361..2649)
    103 previous assembly Zv9 (GCF_000002035.4) Unplaced Scaffold NW_003336693.1 (2361..2649)

    NW_003336693.1Genomic Context describing neighboring genes

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    multicellular organismal development IEA
    Inferred from Electronic Annotation
    more info
     
    pronephros development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    pronephros development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    cilium IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    ankyrin repeat and SAM domain-containing protein 6
    Names
    ankyrin repeat and SAM domain-containing protein 6
    SAM domain-containing protein 6
    ankyrin repeat domain-containing protein 14
    samCystin
    sterile alpha motif domain-containing protein 6

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005928.1NP_001005928.1  ankyrin repeat and SAM domain-containing protein 6

      See identical proteins and their annotated locations for NP_001005928.1

      Status: PROVISIONAL

      Source sequence(s)
      BC083503
      UniProtKB/Swiss-Prot
      Q5XJ13
      Conserved Domains (4) summary
      cd09518
      Location:641705
      SAM_ANKS6; SAM domain of ANKS6 (or SamCystin) subfamily
      smart00454
      Location:644703
      SAM; Sterile alpha motif
      cd00204
      Location:91247
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:164256
      Ank_2; Ankyrin repeats (3 copies)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz10 Primary Assembly

    Genomic

    1. NW_003336693.1 Reference GRCz10 Primary Assembly

      Range
      2361..2649
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)