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    Os03g0171900 Os03g0171900 [ Oryza sativa Japonica Group ]

    Gene ID: 4331779, updated on 26-Jun-2015
    Gene symbol
    Os03g0171900
    Gene description
    Os03g0171900
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oryza sativa Japonica Group (cultivar: Nipponbare)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza
    See Os03g0171900 in MapViewer
    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_008396.2 (3832640..3836674)

    Chromosome 3 - NC_008396.2Genomic Context describing neighboring genes Neighboring gene Os03g0171600 Neighboring gene Os03g0171700 Neighboring gene Os03g0172000 Neighboring gene Os03g0172100

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Homology

    • Homologs of the Os03g0171900 gene: The Os03g0171900 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, A.thaliana, rice, and frog.

    Repeated regions

    • Loc: 3834719-3834872

    Gene Ontology Provided by Gramene

    Component Evidence Code Pubs
    mitochondrion RCA
    inferred from Reviewed Computational Analysis
    more info
     
    Preferred Names
    Os03g0171900
    Names
    hypothetical protein
    NP_001049115.1
    • Similar to Alanine:glyoxylate aminotransferase-like protein (Fragment)
      contains InterPro domain(s): IPR005814
      has GO asignment(s): GO:0008483, GO:0030170
      supported by AK105642

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_008396.2 Reference assembly

      Range
      3832640..3836674
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001055650.1NP_001049115.1  Os03g0171900 [Oryza sativa Japonica Group]

      See identical proteins and their annotated locations for NP_001049115.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q10R45
      Conserved Domains (2) summary
      cd00610
      Location:82480
      OAT_like; Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, ...
      PRK06918
      Location:62468
      PRK06918; 4-aminobutyrate aminotransferase; Reviewed