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    Ankle1 ankyrin repeat and LEM domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 234396, updated on 26-Jun-2015
    Official Symbol
    Ankle1provided by MGI
    Official Full Name
    ankyrin repeat and LEM domain containing 1provided by MGI
    Primary source
    MGI:MGI:1918775
    See related
    Ensembl:ENSMUSG00000046295; Vega:OTTMUSG00000029800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Lem3; Ankrd41; C430003I23; 8430438L13Rik
    Orthologs
    See Ankle1 in Epigenomics, MapViewer
    Location:
    8; 8 B3.3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    105 current GRCm38.p3 (GCF_000001635.23) 8 NC_000074.6 (71406005..71410543)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (73929911..73933803)

    Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene BRISC and BRCA1 A complex member 1 Neighboring gene predicted gene, 39193 Neighboring gene predicted gene, 39192 Neighboring gene predicted gene, 39194 Neighboring gene abhydrolase domain containing 8

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    Preferred Names
    ankyrin repeat and LEM domain-containing protein 1
    Names
    ankyrin repeat and LEM domain-containing protein 1
    LEM-domain containing 3
    ankyrin repeat domain 41

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172756.2NP_766344.2  ankyrin repeat and LEM domain-containing protein 1

      See identical proteins and their annotated locations for NP_766344.2

      Status: VALIDATED

      Source sequence(s)
      BC094316, CJ046325, EU184014
      Consensus CDS
      CCDS52583.1
      UniProtKB/TrEMBL
      A8VU90
      Related
      ENSMUSP00000113162, OTTMUSP00000038356, ENSMUST00000119976, OTTMUST00000073966
      Conserved Domains (5) summary
      cd10454
      Location:372484
      GIY-YIG_COG3680_Meta; GIY-YIG domain of hypothetical proteins from Metazoa
      cd00204
      Location:26128
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:26106
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:76128
      Ank_4; Ankyrin repeats (many copies)
      cl02649
      Location:285322
      LEM; LEM (Lap2/Emerin/Man1) domain found in emerin, lamina-associated polypeptide 2 (LAP2), inner nuclear membrane protein Man1 and similar proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p3 C57BL/6J

    Genomic

    1. NC_000074.6 Reference GRCm38.p3 C57BL/6J

      Range
      71406005..71410543
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011242300.1XP_011240602.1  

      See identical proteins and their annotated locations for XP_011240602.1

      Conserved Domains (5) summary
      cd10454
      Location:352464
      GIY-YIG_COG3680_Meta; GIY-YIG domain of hypothetical proteins from Metazoa
      cd00204
      Location:26128
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:26106
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:76128
      Ank_4; Ankyrin repeats (many copies)
      cl02649
      Location:265302
      LEM; LEM (Lap2/Emerin/Man1) domain found in emerin, lamina-associated polypeptide 2 (LAP2), inner nuclear membrane protein Man1 and similar proteins
    2. XM_006509661.2XP_006509724.1  

      Conserved Domains (5) summary
      cd10454
      Location:351463
      GIY-YIG_COG3680_Meta; GIY-YIG domain of hypothetical proteins from Metazoa
      cd00204
      Location:26128
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:26106
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:76128
      Ank_4; Ankyrin repeats (many copies)
      cl02649
      Location:264301
      LEM; LEM (Lap2/Emerin/Man1) domain found in emerin, lamina-associated polypeptide 2 (LAP2), inner nuclear membrane protein Man1 and similar proteins
    3. XM_006509662.2XP_006509725.1  

      Conserved Domains (2) summary
      cd10454
      Location:88200
      GIY-YIG_COG3680_Meta; GIY-YIG domain of hypothetical proteins from Metazoa
      cl02649
      Location:138
      LEM; LEM (Lap2/Emerin/Man1) domain found in emerin, lamina-associated polypeptide 2 (LAP2), inner nuclear membrane protein Man1 and similar proteins

    RNA

    1. XR_379041.2 RNA Sequence

    Alternate Mm_Celera

    Genomic

    1. AC_000030.1 Alternate Mm_Celera

      Range
      73930693..73934585
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)