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    Rpp40 ribonuclease P 40 subunit [ Mus musculus (house mouse) ]

    Gene ID: 208366, updated on 26-Jun-2015
    Official Symbol
    Rpp40provided by MGI
    Official Full Name
    ribonuclease P 40 subunitprovided by MGI
    Primary source
    MGI:MGI:1346084
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rnasep1; D8Bwg1265e
    Orthologs
    See Rpp40 in Epigenomics, MapViewer
    Location:
    13; 13 A3.3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    105 current GRCm38.p3 (GCF_000001635.23) 13 NC_000079.6 (35895104..35911565, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (35986973..35998216, complement)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 40911 Neighboring gene chromodomain protein, Y chromosome-like Neighboring gene predicted gene, 30127 Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 3G Neighboring gene LYR motif containing 4 Neighboring gene predicted pseudogene 4024

    • RNA transport, organism-specific biosystem (from KEGG)
      RNA transport, organism-specific biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
    • RNA transport, conserved biosystem (from KEGG)
      RNA transport, conserved biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
    • Ribosome biogenesis in eukaryotes, organism-specific biosystem (from KEGG)
      Ribosome biogenesis in eukaryotes, organism-specific biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...
    • Ribosome biogenesis in eukaryotes, conserved biosystem (from KEGG)
      Ribosome biogenesis in eukaryotes, conserved biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...

    Markers

    Homology

    Clone Names

    • MGC25944

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    ribonuclease P activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    Process Evidence Code Pubs
    RNA phosphodiester bond hydrolysis, endonucleolytic ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    tRNA 5'-leader removal ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    tRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    nucleolar ribonuclease P complex ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    ribonuclease P protein subunit p40
    Names
    ribonuclease P protein subunit p40
    RNaseP protein p40
    ribonuclease P 40kDa subunit
    ribonuclease P1
    NP_666050.3

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145938.4NP_666050.3  ribonuclease P protein subunit p40

      See identical proteins and their annotated locations for NP_666050.3

      Status: VALIDATED

      Source sequence(s)
      AC134860, AC159209, AK048810
      Consensus CDS
      CCDS26451.2
      UniProtKB/Swiss-Prot
      Q8R1F9
      Conserved Domains (1) summary
      pfam08584
      Location:74347
      Ribonuc_P_40; Ribonuclease P 40kDa (Rpp40) subunit

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p3 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p3 C57BL/6J

      Range
      35895104..35911565
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011244302.1XP_011242604.1  

      See identical proteins and their annotated locations for XP_011242604.1

      Conserved Domains (1) summary
      pfam08584
      Location:14287
      Ribonuc_P_40; Ribonuclease P 40kDa (Rpp40) subunit
    2. XM_006516631.2XP_006516694.1  

      Conserved Domains (1) summary
      pfam08584
      Location:40313
      Ribonuc_P_40; Ribonuclease P 40kDa (Rpp40) subunit

    Alternate Mm_Celera

    Genomic

    1. AC_000035.1 Alternate Mm_Celera

      Range
      37009759..37021002
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)