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    S100a11 S100 calcium binding protein A11 (calgizzarin) [ Mus musculus (house mouse) ]

    Gene ID: 20195, updated on 26-Jun-2015
    Official Symbol
    S100a11provided by MGI
    Official Full Name
    S100 calcium binding protein A11 (calgizzarin)provided by MGI
    Primary source
    MGI:MGI:1338798
    See related
    Ensembl:ENSMUSG00000027907; Vega:OTTMUSG00000022126
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    cal; EMAPI; Emap1; S100c; S100a14
    Orthologs
    See S100a11 in Epigenomics, MapViewer
    Location:
    3; 3 E-F
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    105 current GRCm38.p3 (GCF_000001635.23) 3 NC_000069.6 (93520496..93526288)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (93324418..93330210)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene trichohyalin Neighboring gene trichohyalin-like 1 Neighboring gene predicted gene, 29950 Neighboring gene S100 calcium binding protein A10 (calpactin)

    Related articles in PubMed

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Clone Names

    • MGC107585

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    calcium-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    regulation of cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    NOT spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    protein S100-A11
    Names
    protein S100-A11
    EMAP
    S100 calcium binding protein A11 (calizzarin)
    S100 calcium binding protein A14
    S100 calcium-binding protein A11
    calgizzarin
    calizzarin
    endothelial monocyte activating polypeptide 1
    endothelial monocyte-activating polypeptide
    protein S100-C

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_016740.3NP_058020.1  protein S100-A11

      See identical proteins and their annotated locations for NP_058020.1

      Status: VALIDATED

      Source sequence(s)
      AA207524, AK164352
      Consensus CDS
      CCDS38525.1
      UniProtKB/Swiss-Prot
      P50543
      Related
      ENSMUSP00000029515, OTTMUSP00000024913, ENSMUST00000029515, OTTMUST00000052513
      Conserved Domains (2) summary
      cd05023
      Location:290
      S-100A11; S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 ...
      pfam13499
      Location:2279
      EF-hand_7; EF-hand domain pair

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p3 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p3 C57BL/6J

      Range
      93520496..93526288
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Mm_Celera

    Genomic

    1. AC_000025.1 Alternate Mm_Celera

      Range
      93567964..93573773
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)