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    Brms1 breast cancer metastasis-suppressor 1 [ Mus musculus (house mouse) ]

    Gene ID: 107392, updated on 26-Jun-2015
    Official Symbol
    Brms1provided by MGI
    Official Full Name
    breast cancer metastasis-suppressor 1provided by MGI
    Primary source
    MGI:MGI:2388804
    See related
    Ensembl:ENSMUSG00000080268
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AV003220; AW554636
    Orthologs
    See Brms1 in Epigenomics, MapViewer
    Location:
    19; 19 A
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    105 current GRCm38.p3 (GCF_000001635.23) 19 NC_000085.6 (5041236..5049917)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (5041404..5049917)

    Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 30581 Neighboring gene nuclear encoded tRNA serine 20 (anticodon GCT) Neighboring gene beta-1,4-glucuronyltransferase 1 Neighboring gene Ras and Rab interactor 1 Neighboring gene CD248 antigen, endosialin

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 
    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    NF-kappaB binding ISO
    Inferred from Sequence Orthology
    more info
     
    contributes_to histone deacetylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    histone deacetylase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    cellular process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    histone deacetylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    negative regulation of NF-kappaB transcription factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    negative regulation of transcription from RNA polymerase II promoter IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    negative regulation of transcription, DNA-templated ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of anoikis ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of protein deacetylation ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Sin3-type complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    breast cancer metastasis-suppressor 1 homolog
    Names
    breast cancer metastasis-suppressor 1 homolog

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134155.1NP_598916.1  breast cancer metastasis-suppressor 1 homolog

      See identical proteins and their annotated locations for NP_598916.1

      Status: PROVISIONAL

      Source sequence(s)
      BC016108
      Consensus CDS
      CCDS50355.1
      UniProtKB/TrEMBL
      Q547N0
      UniProtKB/Swiss-Prot
      Q99N20
      Related
      ENSMUSP00000112266, ENSMUST00000116567
      Conserved Domains (1) summary
      pfam08598
      Location:58229
      Sds3; Sds3-like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p3 C57BL/6J

    Genomic

    1. NC_000085.6 Reference GRCm38.p3 C57BL/6J

      Range
      5041236..5049917
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006531624.2XP_006531687.1  

      Conserved Domains (1) summary
      pfam08598
      Location:150270
      Sds3; Sds3-like
    2. XM_006531623.2XP_006531686.1  

      Conserved Domains (1) summary
      pfam08598
      Location:150321
      Sds3; Sds3-like
    3. XM_006531625.2XP_006531688.1  

      Conserved Domains (1) summary
      pfam08598
      Location:58178
      Sds3; Sds3-like

    Alternate Mm_Celera

    Genomic

    1. AC_000041.1 Alternate Mm_Celera

      Range
      4910502..4919021
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)