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rnt RNase T; exoribonuclease T; structured DNA 3' exonuclease; RNA processing; DNA repair [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946159, updated on 27-Aug-2014
Gene symbol
rnt
Gene description
RNase T; exoribonuclease T; structured DNA 3' exonuclease; RNA processing; DNA repair
Primary source
EcoGene:EG11547
Locus tag
b1652
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
Also known as
ECK1648; JW1644
Summary
RNase T is a 3'-5' exonuclease responsible for 3' trimming of many stable RNAs, including tRNAs. [More information is available at EcoCyc: EG11547].
Sequence:
NC_000913.3 (1728347..1728994)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene chromate reductase, quinone reductase, FMN-linked; N-Ethylmaleimide reductase; old yellow enzyme Neighboring gene glyoxalase I, Ni-dependent Neighboring gene putative ATP-dependent helicase Neighboring gene glutaredoxin-4

Products Interactant Other Gene Complex Source Pubs Description
Names
RNase T; exoribonuclease T; structured DNA 3' exonuclease; RNA processing; DNA repair
NP_416169.1
  • RNase T, degrades tRNA

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 

    Range
    1728347..1728994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416169.1 RNase T; exoribonuclease T; structured DNA 3' exonuclease; RNA processing; DNA repair [Escherichia coli str. K-12 substr. MG1655]

    See proteins identical to NP_416169.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P30014
    Conserved Domains (2) summary
    cd06134
    Location:13201
    Blast Score: 944
    RNaseT; DEDDh 3'-5' exonuclease domain of RNase T
    COG0847
    Location:10215
    Blast Score: 364
    DnaQ; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]