Display Settings:

Format

Send to:

Choose Destination
    • Showing Current items.

    Dsg3 desmoglein 3 [ Mus musculus (house mouse) ]

    Gene ID: 13512, updated on 4-Jul-2015
    Official Symbol
    Dsg3provided by MGI
    Official Full Name
    desmoglein 3provided by MGI
    Primary source
    MGI:MGI:99499
    See related
    Ensembl:ENSMUSG00000056632
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    bal; balding
    Orthologs
    See Dsg3 in Epigenomics, MapViewer
    Location:
    18 A2; 18 11.39 cM
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    105 current GRCm38.p3 (GCF_000001635.23) 18 NC_000084.6 (20510304..20541310)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (20668805..20699811)

    Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene desmoglein 4 Neighboring gene tubulin, alpha 1C pseudogene Neighboring gene triosephosphate isomerase related sequence 10 Neighboring gene desmoglein 2 Neighboring gene predicted gene 16090

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    cell adhesion TAS
    Traceable Author Statement
    more info
    PubMed 
    homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    desmosome TAS
    Traceable Author Statement
    more info
    PubMed 
    extracellular exosome ISO
    Inferred from Sequence Orthology
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of plasma membrane TAS
    Traceable Author Statement
    more info
    PubMed 
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    spot adherens junction TAS
    Traceable Author Statement
    more info
    PubMed 
    Preferred Names
    desmoglein-3
    Names
    130 kDa pemphigus vulgaris antigen homolog

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_030596.3NP_085099.2  desmoglein-3 precursor

      See identical proteins and their annotated locations for NP_085099.2

      Status: PROVISIONAL

      Source sequence(s)
      AK148657
      Consensus CDS
      CCDS29083.1
      UniProtKB/TrEMBL
      Q3UFC6
      Related
      ENSMUSP00000064718, ENSMUST00000070892
      Conserved Domains (2) summary
      cd11304
      Location:161263
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam01049
      Location:790840
      Cadherin_C; Cadherin cytoplasmic region

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p3 C57BL/6J

    Genomic

    1. NC_000084.6 Reference GRCm38.p3 C57BL/6J

      Range
      20510304..20541310
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Mm_Celera

    Genomic

    1. AC_000040.1 Alternate Mm_Celera

      Range
      21015830..21040888
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    2. NW_001075989.1 Alternate Mm_Celera

      Range
      1789..10599
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)