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    Gpr88 G-protein coupled receptor 88 [ Mus musculus (house mouse) ]

    Gene ID: 64378, updated on 1-Dec-2015
    Official Symbol
    Gpr88provided by MGI
    Official Full Name
    G-protein coupled receptor 88provided by MGI
    Primary source
    MGI:MGI:1927653
    See related
    Ensembl:ENSMUSG00000068696; Vega:OTTMUSG00000054451
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Strg; AW061286
    Orthologs
    See Gpr88 in Epigenomics, MapViewer
    Location:
    3; 3 G1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    105 current GRCm38.p3 (GCF_000001635.23) 3 NC_000069.6 (116249654..116253498, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (115952572..115956402, complement)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 26544 Neighboring gene predicted gene, 31651 Neighboring gene CDC14 cell division cycle 14A Neighboring gene predicted gene, 40125 Neighboring gene RNA 3'-terminal phosphate cyclase

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    • GPCRs, Other, organism-specific biosystem (from WikiPathways)
      GPCRs, Other, organism-specific biosystemThis pathway was created using the GPCRDB (Horn et al., 1998), http://www.cmbi.kun.nl/7tm/. The groupings are based on the GPCR phylogenetic tree available from the GPCRDB and the training sets used ...
    • Odorant GPCRs, organism-specific biosystem (from WikiPathways)
      Odorant GPCRs, organism-specific biosystem
      Odorant GPCRs

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    G-protein coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    G-protein coupled receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    signal transducer activity IEA
    Inferred from Electronic Annotation
    more info
     
    transmembrane signaling receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    G-protein coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    cell surface receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    locomotory behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuromuscular process controlling balance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuronal action potential IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    probable G-protein coupled receptor 88
    Names
    striatum-specific G-protein coupled receptor

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022427.2NP_071872.1  probable G-protein coupled receptor 88

      See identical proteins and their annotated locations for NP_071872.1

      Status: VALIDATED

      Source sequence(s)
      AC122888
      Consensus CDS
      CCDS38610.1
      UniProtKB/TrEMBL
      B2RXU4
      UniProtKB/Swiss-Prot
      Q9EPB7
      Related
      ENSMUSP00000087959, OTTMUSP00000071536, ENSMUST00000090473, OTTMUST00000135035
      Conserved Domains (1) summary
      pfam00001
      Location:54166
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p3 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p3 C57BL/6J

      Range
      116249654..116253498 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006501856.1XP_006501919.1  

      See identical proteins and their annotated locations for XP_006501919.1

      UniProtKB/TrEMBL
      B2RXU4
      UniProtKB/Swiss-Prot
      Q9EPB7
      Conserved Domains (1) summary
      pfam00001
      Location:54166
      7tm_1; 7 transmembrane receptor (rhodopsin family)
    2. XM_006501857.1XP_006501920.1  

      See identical proteins and their annotated locations for XP_006501920.1

      UniProtKB/TrEMBL
      B2RXU4
      UniProtKB/Swiss-Prot
      Q9EPB7
      Conserved Domains (1) summary
      pfam00001
      Location:54166
      7tm_1; 7 transmembrane receptor (rhodopsin family)
    3. XM_006501858.2XP_006501921.1  

      See identical proteins and their annotated locations for XP_006501921.1

      UniProtKB/TrEMBL
      B2RXU4
      UniProtKB/Swiss-Prot
      Q9EPB7
      Conserved Domains (1) summary
      pfam00001
      Location:54166
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    Alternate Mm_Celera

    Genomic

    1. AC_000025.1 Alternate Mm_Celera

      Range
      122679632..122683466 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)