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Gpr88 G-protein coupled receptor 88 [ Mus musculus (house mouse) ]

Gene ID: 64378, updated on 30-Jun-2014
Official Symbol
Gpr88provided by MGI
Official Full Name
G-protein coupled receptor 88provided by MGI
Primary source
MGI:1927653
See related
Ensembl:ENSMUSG00000068696
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Strg; AW061286
See Gpr88 in Epigenomics, MapViewer
Location:
3; 3 G1
Exon count :
3
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 3 NC_000069.6 (116249654..116253498, complement)

Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102633872 Neighboring gene uncharacterized LOC102633953 Neighboring gene uncharacterized LOC102634059 Neighboring gene CDC14 cell division cycle 14A

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • GPCRs, Other, organism-specific biosystem (from WikiPathways)
    GPCRs, Other, organism-specific biosystemThis pathway was created using the GPCRDB (Horn et al., 1998), http://www.cmbi.kun.nl/7tm/. The groupings are based on the GPCR phylogenetic tree available from the GPCRDB and the training sets used ...
  • Odorant GPCRs, organism-specific biosystem (from WikiPathways)
    Odorant GPCRs, organism-specific biosystem
    Odorant GPCRs

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
G-protein coupled receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
signal transducer activity IEA
Inferred from Electronic Annotation
more info
 
transmembrane signaling receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
G-protein coupled receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
locomotory behavior IMP
Inferred from Mutant Phenotype
more info
 
neuromuscular process controlling balance IMP
Inferred from Mutant Phenotype
more info
 
neuronal action potential IMP
Inferred from Mutant Phenotype
more info
 
signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
probable G-protein coupled receptor 88
Names
probable G-protein coupled receptor 88
striatum-specific G-protein coupled receptor

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_022427.2NP_071872.1  probable G-protein coupled receptor 88

    See proteins identical to NP_071872.1

    Status: VALIDATED

    Source sequence(s)
    AC122888
    Consensus CDS
    CCDS38610.1
    UniProtKB/TrEMBL
    B2RXU4
    UniProtKB/Swiss-Prot
    Q9EPB7
    Related
    ENSMUSP00000087959, ENSMUST00000090473
    Conserved Domains (1) summary
    pfam00001
    Location:54166
    Blast Score: 95
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000069.6 

    Range
    116249654..116253498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006501856.1XP_006501919.1  

    See proteins identical to XP_006501919.1

    UniProtKB/TrEMBL
    B2RXU4
    UniProtKB/Swiss-Prot
    Q9EPB7
    Conserved Domains (1) summary
    pfam00001
    Location:54166
    Blast Score: 95
    7tm_1; 7 transmembrane receptor (rhodopsin family)
  2. XM_006501857.1XP_006501920.1  

    See proteins identical to XP_006501920.1

    UniProtKB/TrEMBL
    B2RXU4
    UniProtKB/Swiss-Prot
    Q9EPB7
    Conserved Domains (1) summary
    pfam00001
    Location:54166
    Blast Score: 95
    7tm_1; 7 transmembrane receptor (rhodopsin family)
  3. XM_006501858.1XP_006501921.1  

    See proteins identical to XP_006501921.1

    UniProtKB/TrEMBL
    B2RXU4
    UniProtKB/Swiss-Prot
    Q9EPB7
    Conserved Domains (1) summary
    pfam00001
    Location:54166
    Blast Score: 95
    7tm_1; 7 transmembrane receptor (rhodopsin family)

Alternate Mm_Celera

Genomic

  1. AC_000025.1 

    Range
    122679632..122683466
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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