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algL poly(beta-D-mannuronate) lyase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878552, updated on 16-May-2014
Gene symbol
algL
Gene description
poly(beta-D-mannuronate) lyase
Locus tag
PA3547
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Sequence:
NC_002516.2 (3973014..3974117)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene alginate-c5-mannuronan-epimerase AlgG Neighboring gene alginate biosynthesis protein AlgX Neighboring gene alginate o-acetyltransferase AlgI Neighboring gene alginate o-acetyltransferase AlgJ

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Names
poly(beta-D-mannuronate) lyase
NP_252237.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 

    Range
    3973014..3974117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252237.1 poly(beta-D-mannuronate) lyase [Pseudomonas aeruginosa PAO1]

    See proteins identical to NP_252237.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q06749
    Conserved Domains (1) summary
    cd00244
    Location:24361
    Blast Score: 1563
    AlgLyase; Alginate Lyase A1-III; enzymatically depolymerizes alginate, a complex copolymer of beta-D-mannuronate and alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic bond.

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