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    gbb glass bottom boat [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37778, updated on 27-Jun-2015
    Official Symbol
    gbbprovided by FlyBase
    Official Full Name
    glass bottom boatprovided by FlyBase
    Primary source
    FLYBASE:FBgn0024234
    Locus tag
    Dmel_CG5562
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    60A; BMP; CG5562; Dm-GBB; Dmel\CG5562; Gbb; GBB; gbb-60A; Gbb-60A; gcn; l(2)60A-J; SixtyA; TGF-b; Tgfb-60; tgfb-60A; Tgfbeta-60A; TGFbeta-60A; vgr/60A
    Location:
    60A3-60A4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.01 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (23851562..23853247)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (19739085..19740770)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene CG5554 gene product from transcript CG5554-RB Neighboring gene yantar Neighboring gene CG17611 gene product from transcript CG17611-RA Neighboring gene benign gonial cell neoplasm Neighboring gene within bgcn Neighboring gene TAR DNA-binding protein-43 homolog

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    • Peptidoglycan biosynthesis, organism-specific biosystem (from KEGG)
      Peptidoglycan biosynthesis, organism-specific biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
    • Peptidoglycan biosynthesis, organism-specific biosystem (from KEGG)
      Peptidoglycan biosynthesis, organism-specific biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
    • Peptidoglycan biosynthesis, organism-specific biosystem (from KEGG)
      Peptidoglycan biosynthesis, organism-specific biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
    • Peptidoglycan biosynthesis, organism-specific biosystem (from KEGG)
      Peptidoglycan biosynthesis, organism-specific biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
    • Peptidoglycan biosynthesis, organism-specific biosystem (from KEGG)
      Peptidoglycan biosynthesis, organism-specific biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
    • Peptidoglycan biosynthesis, organism-specific biosystem (from KEGG)
      Peptidoglycan biosynthesis, organism-specific biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
    • Peptidoglycan biosynthesis, organism-specific biosystem (from KEGG)
      Peptidoglycan biosynthesis, organism-specific biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
    Products Interactant Other Gene Complex Source Pubs Description

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    growth factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    transforming growth factor beta receptor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    transforming growth factor beta receptor binding NAS
    Non-traceable Author Statement
    more info
     
    Process Evidence Code Pubs
    BMP signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    dorsal closure TAS
    Traceable Author Statement
    more info
    PubMed 
    female germ-line stem cell maintenance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    imaginal disc-derived wing vein morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    imaginal disc-derived wing vein specification IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuromuscular junction development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuromuscular synaptic transmission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    ovarian follicle cell development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of muscle organ development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    positive regulation of synaptic growth at neuromuscular junction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of neurotransmitter secretion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    transforming growth factor beta receptor signaling pathway NAS
    Non-traceable Author Statement
    more info
     
    wing disc pattern formation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    endomembrane system IDA
    Inferred from Direct Assay
    more info
    PubMed 
    extracellular region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    extracellular region ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Preferred Names
    CG5562 gene product from transcript CG5562-RA
    Names
    CG5562-PA
    CG5562-PB
    bone morphogenetic protein
    bone morphogenic protein
    gbb-PA
    gbb-PB
    glass bottom boat
    glass bottom boat-60A
    glass-bottom boat
    glass-bottomed boat
    transforming growth factor beta at 60A

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      23851562..23853247
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057992.3NP_477340.1  glass bottom boat, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_477340.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LGA7
      UniProtKB/Swiss-Prot
      P27091
      Related
      FBpp0072036, FBtr0072127
      Conserved Domains (2) summary
      smart00204
      Location:354455
      TGFB; Transforming growth factor-beta (TGF-beta) family
      pfam00688
      Location:43305
      TGFb_propeptide; TGF-beta propeptide
    2. NM_001299857.1NP_001286786.1  glass bottom boat, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286786.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LGA7
      UniProtKB/Swiss-Prot
      P27091
      Related
      FBpp0309939, FBtr0343274
      Conserved Domains (2) summary
      smart00204
      Location:354455
      TGFB; Transforming growth factor-beta (TGF-beta) family
      pfam00688
      Location:43305
      TGFb_propeptide; TGF-beta propeptide