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abd-A abdominal A [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42037, updated on 7-Dec-2014
Official Symbol
abd-Aprovided by FlyBase
Official Full Name
abdominal Aprovided by FlyBase
Primary source
FLYBASE:FBgn0000014
Locus tag
Dmel_CG10325
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
abd A; abd-a; Abd-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec
See abd-A in Epigenomics, MapViewer
Location:
89E2-89E2; 3-58.8 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.01 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (16807214..16830049, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (12632936..12655771, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene iab-8 non-coding RNA Neighboring gene mir-iab-4 stem loop Neighboring gene mir-iab-8 stem loop Neighboring gene ncRNA Neighboring gene ncRNA

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
anterior/posterior pattern specification IMP
Inferred from Mutant Phenotype
more info
PubMed 
apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
cardiac muscle tissue development IMP
Inferred from Mutant Phenotype
more info
PubMed 
cardioblast differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
cellular process IMP
Inferred from Mutant Phenotype
more info
PubMed 
determination of genital disc primordium IMP
Inferred from Mutant Phenotype
more info
PubMed 
dorsal vessel heart proper cell fate commitment IEP
Inferred from Expression Pattern
more info
PubMed 
dorsal vessel heart proper cell fate commitment IMP
Inferred from Mutant Phenotype
more info
PubMed 
dorsal vessel heart proper cell fate commitment TAS
Traceable Author Statement
more info
PubMed 
genital disc anterior/posterior pattern formation IEP
Inferred from Expression Pattern
more info
PubMed 
genitalia development IMP
Inferred from Mutant Phenotype
more info
PubMed 
germ cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
germ cell migration TAS
Traceable Author Statement
more info
PubMed 
gonad development NAS
Non-traceable Author Statement
more info
 
gonad development TAS
Traceable Author Statement
more info
PubMed 
gonadal mesoderm development IMP
Inferred from Mutant Phenotype
more info
PubMed 
heart development IMP
Inferred from Mutant Phenotype
more info
PubMed 
mesodermal cell fate specification IMP
Inferred from Mutant Phenotype
more info
PubMed 
midgut development TAS
Traceable Author Statement
more info
PubMed 
muscle cell fate specification IMP
Inferred from Mutant Phenotype
more info
PubMed 
nervous system development IMP
Inferred from Mutant Phenotype
more info
PubMed 
neuroblast development IMP
Inferred from Mutant Phenotype
more info
PubMed 
neuroblast fate determination IMP
Inferred from Mutant Phenotype
more info
PubMed 
oenocyte development IMP
Inferred from Mutant Phenotype
more info
PubMed 
peripheral nervous system development TAS
Traceable Author Statement
more info
PubMed 
pole cell migration TAS
Traceable Author Statement
more info
PubMed 
positive regulation of muscle organ development IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of transcription from RNA polymerase II promoter IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription, DNA-templated IMP
Inferred from Mutant Phenotype
more info
PubMed 
specification of segmental identity, abdomen NAS
Non-traceable Author Statement
more info
 
Component Evidence Code Pubs
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus NAS
Non-traceable Author Statement
more info
 
transcription factor complex IPI
Inferred from Physical Interaction
more info
PubMed 
Preferred Names
CG10325 gene product from transcript CG10325-RD
Names
Abdominal-A
CG10325-PA
CG10325-PB
CG10325-PC
CG10325-PD
abd-A-PA
abd-A-PB
abd-A-PC
abd-A-PD
abdominal A
abdominalA
contrabithoraxoid
hyperabdominal
infra-abdominal 2
infra-abdominal 3
infra-abdominal 4
infraabdominal
ultraabdominal

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 

    Range
    16807214..16830049
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001260216.2NP_001247145.1  abdominal A, isoform D [Drosophila melanogaster]

    See proteins identical to NP_001247145.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1JIM9
    UniProtKB/Swiss-Prot
    P29555
    Related
    FBpp0297433, FBtr0306337
    Conserved Domains (2) summary
    cd00086
    Location:139196
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam12407
    Location:196218
    Abdominal-A; Homeobox protein
  2. NM_057345.5NP_476693.1  abdominal A, isoform A [Drosophila melanogaster]

    See proteins identical to NP_476693.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1JIM9
    UniProtKB/Swiss-Prot
    P29555
    Related
    FBpp0082828, FBtr0083387
    Conserved Domains (2) summary
    cd00086
    Location:139196
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam12407
    Location:196218
    Abdominal-A; Homeobox protein
  3. NM_001170161.2NP_001163632.1  abdominal A, isoform C [Drosophila melanogaster]

    See proteins identical to NP_001163632.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1JIM9
    UniProtKB/Swiss-Prot
    P29555
    Related
    FBpp0289712, FBtr0300485
    Conserved Domains (2) summary
    cd00086
    Location:139196
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam12407
    Location:196218
    Abdominal-A; Homeobox protein
  4. NM_169733.5NP_732176.1  abdominal A, isoform B [Drosophila melanogaster]

    See proteins identical to NP_732176.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P29555
    Related
    FBpp0082829, FBtr0083388
    Conserved Domains (2) summary
    cd00086
    Location:399456
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam12407
    Location:456478
    Abdominal-A; Homeobox protein