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Tslp thymic stromal lymphopoietin [ Mus musculus (house mouse) ]

Gene ID: 53603, updated on 30-Jun-2014
Official Symbol
Tslpprovided by MGI
Official Full Name
thymic stromal lymphopoietinprovided by MGI
Primary source
MGI:1855696
See related
Ensembl:ENSMUSG00000024379
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
See Tslp in Epigenomics, MapViewer
Location:
18 B1; 18 18.12 cM
Exon count :
5
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 18 NC_000084.6 (32815383..32819799)

Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene glycophorin C Neighboring gene uncharacterized LOC102639080 Neighboring gene RIKEN cDNA 4930455D15 gene Neighboring gene WD repeat domain 36 Neighboring gene microRNA mir-6361

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Cytokine-cytokine receptor interaction, organism-specific biosystem (from KEGG)
    Cytokine-cytokine receptor interaction, organism-specific biosystemCytokines are soluble extracellular proteins or glycoproteins that are crucial intercellular regulators and mobilizers of cells engaged in innate as well as adaptive inflammatory host defenses, cell ...
  • Cytokine-cytokine receptor interaction, conserved biosystem (from KEGG)
    Cytokine-cytokine receptor interaction, conserved biosystemCytokines are soluble extracellular proteins or glycoproteins that are crucial intercellular regulators and mobilizers of cells engaged in innate as well as adaptive inflammatory host defenses, cell ...
  • Jak-STAT signaling pathway, organism-specific biosystem (from KEGG)
    Jak-STAT signaling pathway, organism-specific biosystemThe Janus kinase/signal transducers and activators of transcription (JAK/STAT) pathway is one of a handful of pleiotropic cascades used to transduce a multitude of signals for development and homeost...
  • Jak-STAT signaling pathway, conserved biosystem (from KEGG)
    Jak-STAT signaling pathway, conserved biosystemThe Janus kinase/signal transducers and activators of transcription (JAK/STAT) pathway is one of a handful of pleiotropic cascades used to transduce a multitude of signals for development and homeost...

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
cytokine activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
extracellular region IEA
Inferred from Electronic Annotation
more info
 
extracellular space IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
thymic stromal lymphopoietin
Names
thymic stromal lymphopoietin
thymic stroma-derived lymphopoietin

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_021367.2NP_067342.1  thymic stromal lymphopoietin precursor

    See proteins identical to NP_067342.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the shorter transcript and encodes the functional protein.
    Source sequence(s)
    AC140983, AK087266, CJ198416
    Consensus CDS
    CCDS29121.1
    UniProtKB/Swiss-Prot
    Q9JIE6
    Related
    ENSMUSP00000025237, ENSMUST00000025237
    Conserved Domains (1) summary
    pfam15216
    Location:20138
    Blast Score: 520
    TSLP; Thymic stromal lymphopoietin

RNA

  1. NR_033206.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks three exons and contains a unique 5' end compared to variant 1. This variant is represented as non-coding because it lacks a large portion of the coding region, including the translational start codon, found in variant 1.
    Source sequence(s)
    AK087266, CJ198416

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000084.6 

    Range
    32815383..32819799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000040.1 

    Range
    33286509..33290920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Supplemental Content

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