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    dbt dihydrolipoamide branched chain transacylase E2 [ Danio rerio (zebrafish) ]

    Gene ID: 541388, updated on 4-Jul-2015
    Official Symbol
    dbtprovided by ZNC
    Official Full Name
    dihydrolipoamide branched chain transacylase E2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050320-85
    See related
    Ensembl:ENSDARG00000101561; Vega:OTTDARG00000016703
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    im:7147214; zgc:103768
    Orthologs
    See dbt in MapViewer
    Location:
    chromosome: 22
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current GRCz10 (GCF_000002035.5) 22 NC_007133.6 (16266894..16279551)
    103 previous assembly Zv9 (GCF_000002035.4) 22 NC_007133.5 (16508272..16519609)

    Chromosome 22 - NC_007133.6Genomic Context describing neighboring genes Neighboring gene cell division cycle 14Ab Neighboring gene RNA 3'-terminal phosphate cyclase Neighboring gene uncharacterized LOC103909583 Neighboring gene tctex1 domain-containing protein 1-like Neighboring gene leucine rich repeat containing 39 Neighboring gene tRNA methyltransferase 13 homolog (S. cerevisiae)

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    transferase activity, transferring acyl groups IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    branched-chain amino acid metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial
    Names
    que
    NP_001013533.1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013515.1NP_001013533.1  lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial

      See identical proteins and their annotated locations for NP_001013533.1

      Status: PROVISIONAL

      Source sequence(s)
      BC090917
      UniProtKB/TrEMBL
      Q5BKV3
      Related
      ENSDARP00000137558, OTTDARP00000047643, ENSDART00000170960, OTTDART00000020090
      Conserved Domains (4) summary
      cd06849
      Location:64137
      lipoyl_domain; Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid ...
      PLN02528
      Location:66493
      PLN02528; 2-oxoisovalerate dehydrogenase E2 component
      pfam00198
      Location:278490
      2-oxoacid_dh; 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
      pfam02817
      Location:170208
      E3_binding; e3 binding domain

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz10 Primary Assembly

    Genomic

    1. NC_007133.6 Reference GRCz10 Primary Assembly

      Range
      16266894..16279551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)