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    KIAA0040 KIAA0040 [ Homo sapiens (human) ]

    Gene ID: 9674, updated on 15-Jun-2016
    Official Symbol
    KIAA0040provided by HGNC
    Official Full Name
    KIAA0040provided by HGNC
    Primary source
    HGNC:HGNC:28950
    See related
    Ensembl:ENSG00000235750 HPRD:13776; MIM:616696; Vega:OTTHUMG00000034880
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Orthologs
    Location:
    1q25.1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    108 current GRCh38.p7 (GCF_000001405.33) 1 NC_000001.11 (175156986..175193300, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (175126123..175162229, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene serologically defined colon cancer antigen 3 pseudogene 2 Neighboring gene tenascin N Neighboring gene uncharacterized LOC105371623 Neighboring gene ribosomal protein S29 pseudogene 4 Neighboring gene tenascin R

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NHGRI GWAS Catalog

    Description
    A meta-analysis of two genome-wide association studies identifies 3 new loci for alcohol dependence.
    NHGRI GWA Catalog
    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Clone Names

    • FLJ75822, MGC133301

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Preferred Names
    uncharacterized protein KIAA0040

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001162893.1NP_001156365.1  uncharacterized protein KIAA0040

      See identical proteins and their annotated locations for NP_001156365.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, 3, and 4 all encode the same protein.
      Source sequence(s)
      AL049800, DA185535, DA337166, DA852435
      UniProtKB/Swiss-Prot
      Q15053
      UniProtKB/TrEMBL
      J3QR46
    2. NM_001162894.1NP_001156366.1  uncharacterized protein KIAA0040

      See identical proteins and their annotated locations for NP_001156366.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) lacks an alternate exon in the 5' UTR, compared to variant 1. All six variants encode the same protein.
      Source sequence(s)
      AL049800, DA337166, DA852435
      UniProtKB/Swiss-Prot
      Q15053
      UniProtKB/TrEMBL
      J3QR46
      Related
      ENSP00000463734, OTTHUMP00000261965, ENST00000444639, OTTHUMT00000084419
    3. NM_001162895.1NP_001156367.1  uncharacterized protein KIAA0040

      See identical proteins and their annotated locations for NP_001156367.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) represents use of an alternate promoter and differs in the 5' UTR, compared to variant 1. All six variants encode the same protein.
      Source sequence(s)
      AL049800, BC050374, DB232064
      UniProtKB/Swiss-Prot
      Q15053
      UniProtKB/TrEMBL
      J3QR46
      Related
      ENSP00000464040, OTTHUMP00000261966, ENST00000545251, OTTHUMT00000431188
    4. NM_001319230.1NP_001306159.1  uncharacterized protein KIAA0040

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. All six variants encode the same protein.
      Source sequence(s)
      AL049800, DA337166, DA414485, DA852435, Z99715
      UniProtKB/Swiss-Prot
      Q15053
      UniProtKB/TrEMBL
      J3QR46
    5. NM_001319231.1NP_001306160.1  uncharacterized protein KIAA0040

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6) differs in the 5' UTR compared to variant 1. All six variants encode the same protein.
      Source sequence(s)
      AL049800, DB232064, DB234724
      UniProtKB/Swiss-Prot
      Q15053
      UniProtKB/TrEMBL
      J3QR46
    6. NM_014656.2NP_055471.2  uncharacterized protein KIAA0040

      See identical proteins and their annotated locations for NP_055471.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) represents use of an alternate promoter and 5' UTR, compared to variant 1. All six variants encode the same protein.
      Source sequence(s)
      AL049799, DB232064
      UniProtKB/Swiss-Prot
      Q15053
      UniProtKB/TrEMBL
      J3QR46
      Related
      ENSP00000462172, OTTHUMP00000261964, ENST00000423313, OTTHUMT00000084420

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p7 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p7 Primary Assembly

      Range
      175156986..175193300 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017002910.1XP_016858399.1  

      Related
      ENSP00000478803, ENST00000619513
    2. XM_017002911.1XP_016858400.1  

    3. XM_017002909.1XP_016858398.1  

    Alternate CHM1_1.1

    Genomic

    1. NC_018912.2 Alternate CHM1_1.1

      Range
      176549003..176585082 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)