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    cnc cap-n-collar [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42743, updated on 1-Aug-2015
    Official Symbol
    cncprovided by FlyBase
    Official Full Name
    cap-n-collarprovided by FlyBase
    Primary source
    FLYBASE:FBgn0262975
    Locus tag
    Dmel_CG43286
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    5134; anon-WO0153538.6; anon-WO0153538.7; BcDNA:RE05559; CG13826; CG17894; CG43286; CG4566; CG4578; Cnc; CNC; cnc-C; CNC_DROME; Dmel\CG43286; l(3)03921; l(3)j5E7; Nrf2
    Old locus tag
    Dmel_CG13826; Dmel_CG17894
    Location:
    94E4-94E7; 3-81.2 cM
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    Release 6.01 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23185580..23226711, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19011302..19052433, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Vacuolar H[+] ATPase AC39 subunit 2 Neighboring gene CG13829 gene product from transcript CG13829-RA Neighboring gene Inwardly rectifying potassium channel 1 Neighboring gene fuzzy onions Neighboring gene CG4467 gene product from transcript CG4467-RB Neighboring gene CG4449 gene product from transcript CG4449-RB

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    protein heterodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein heterodimerization activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to transcription factor activity, sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    transcription factor activity, sequence-specific DNA binding TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus NAS
    Non-traceable Author Statement
    more info
     
    polytene chromosome puff IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    CG43286 gene product from transcript CG43286-RC
    Names
    CG43286-PA
    CG43286-PB
    CG43286-PC
    CG43286-PD
    CG43286-PE
    CG43286-PF
    CG43286-PG
    CG43286-PH
    CG43286-PI
    CG43286-PJ
    CG43286-PK
    CG43286-PL
    CG43286-PM
    CG43286-PN
    CG43286-PO
    CG43286-PP
    Cap 'n' collar
    Cap'n'collar
    Cap'n'collar B
    cap and collar
    cap n collar
    cap-n-collar
    cnc-PA
    cnc-PB
    cnc-PC
    cnc-PD
    cnc-PE
    cnc-PF
    cnc-PG
    cnc-PH
    cnc-PI
    cnc-PJ
    cnc-PK
    cnc-PL
    cnc-PM
    cnc-PN
    cnc-PO
    cnc-PP

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      23185580..23226711
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_170053.3NP_732833.1  cap-n-collar, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732833.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6E1
      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297671, FBtr0306748
      Conserved Domains (1) summary
      cd14698
      Location:11921259
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    2. NM_001275935.1NP_001262864.1  cap-n-collar, isoform O [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262864.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KHP5
      Related
      FBpp0303398, FBtr0330372
      Conserved Domains (1) summary
      cd14698
      Location:11921259
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    3. NM_001260331.1NP_001247260.1  cap-n-collar, isoform K [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247260.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6E1
      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297677, FBtr0306754
      Conserved Domains (1) summary
      cd14698
      Location:11921259
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    4. NM_001260330.1NP_001247259.1  cap-n-collar, isoform J [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247259.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6E1
      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297676, FBtr0306753
      Conserved Domains (1) summary
      cd14698
      Location:11921259
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    5. NM_170058.2NP_732838.2  cap-n-collar, isoform L [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732838.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297678, FBtr0306755
      Conserved Domains (1) summary
      cd14698
      Location:855922
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    6. NM_170054.4NP_732834.1  cap-n-collar, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732834.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297672, FBtr0306749
      Conserved Domains (1) summary
      cd14698
      Location:614681
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    7. NM_001275936.1NP_001262865.1  cap-n-collar, isoform P [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262865.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KGT0
      Related
      FBpp0307561, FBtr0336455
      Conserved Domains (1) summary
      cd14698
      Location:520587
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    8. NM_170059.3NP_732839.1  cap-n-collar, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732839.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6G8
      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297673, FBtr0306750
      Conserved Domains (1) summary
      cd14698
      Location:342409
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    9. NM_001260327.2NP_001247256.1  cap-n-collar, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247256.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6G8
      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297667, FBtr0306744
      Conserved Domains (1) summary
      cd14698
      Location:342409
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    10. NM_170057.2NP_732837.1  cap-n-collar, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732837.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6G8
      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297668, FBtr0306745
      Conserved Domains (1) summary
      cd14698
      Location:342409
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    11. NM_001260328.1NP_001247257.1  cap-n-collar, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247257.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6G8
      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297674, FBtr0306751
      Conserved Domains (1) summary
      cd14698
      Location:342409
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    12. NM_170056.2NP_732836.1  cap-n-collar, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732836.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6G8
      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297669, FBtr0306746
      Conserved Domains (1) summary
      cd14698
      Location:342409
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    13. NM_170055.2NP_732835.1  cap-n-collar, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732835.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6G8
      UniProtKB/Swiss-Prot
      P20482
      Related
      FBpp0297670, FBtr0306747
      Conserved Domains (1) summary
      cd14698
      Location:342409
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    14. NM_001260332.2NP_001247261.1  cap-n-collar, isoform M [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247261.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6Z0
      Related
      FBpp0300546, FBtr0308226
      Conserved Domains (1) summary
      cd14698
      Location:9421009
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    15. NM_001260333.2NP_001247262.1  cap-n-collar, isoform N [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247262.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6Z0
      Related
      FBpp0300547, FBtr0308227
      Conserved Domains (1) summary
      cd14698
      Location:9421009
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
    16. NM_001260329.2NP_001247258.1  cap-n-collar, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247258.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K6Z0
      Related
      FBpp0297675, FBtr0306752
      Conserved Domains (1) summary
      cd14698
      Location:9421009
      bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain