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IMP3 Imp3p [ Saccharomyces cerevisiae S288c ]

Gene ID: 856553, updated on 16-Jan-2015
Gene symbol
IMP3
Gene description
Imp3p
Primary source
SGD:S000001191
Locus tag
YHR148W
Gene type
protein coding
RNA name
Imp3p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See IMP3 in MapViewer
Location:
chromosome: VIII
Exon count:
1
Sequence:
Chromosome: VIII; NC_001140.6 (393534..394085)

Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Crp1p Neighboring gene mitochondrial 54S ribosomal protein YmL16 Neighboring gene Skg6p Neighboring gene Pex28p

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Ribosome biogenesis in eukaryotes, organism-specific biosystem (from KEGG)
    Ribosome biogenesis in eukaryotes, organism-specific biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...
  • Ribosome biogenesis in eukaryotes, conserved biosystem (from KEGG)
    Ribosome biogenesis in eukaryotes, conserved biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...
Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
rRNA binding IEA
Inferred from Electronic Annotation
more info
 
snoRNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
rRNA processing IDA
Inferred from Direct Assay
more info
PubMed 
rRNA processing IEA
Inferred from Electronic Annotation
more info
 
ribosomal small subunit biogenesis IDA
Inferred from Direct Assay
more info
PubMed 
ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
90S preribosome IDA
Inferred from Direct Assay
more info
PubMed 
Mpp10 complex IDA
Inferred from Direct Assay
more info
PubMed 
intracellular IEA
Inferred from Electronic Annotation
more info
 
nucleolus IEA
Inferred from Electronic Annotation
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
small-subunit processome IDA
Inferred from Direct Assay
more info
PubMed 
small-subunit processome IMP
Inferred from Mutant Phenotype
more info
PubMed 
Names
Imp3p
NP_012018.1
  • Component of the SSU processome; SSU processome is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001140.6 

    Range
    393534..394085
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179279.1NP_012018.1  Imp3p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_012018.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P32899
    Conserved Domains (3) summary
    COG0522
    Location:1177
    RpsD; Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis]
    cd00165
    Location:109170
    S4; S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized ...
    pfam00163
    Location:4108
    Ribosomal_S4; Ribosomal protein S4/S9 N-terminal domain