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PF10_0001 erythrocyte membrane protein 1, PfEMP1 [ Plasmodium falciparum 3D7 ]

Gene ID: 810160, updated on 5-Jul-2014
Gene symbol
PF10_0001
Gene description
erythrocyte membrane protein 1, PfEMP1
Locus tag
PF10_0001
Gene type
protein coding
RNA name
erythrocyte membrane protein 1, PfEMP1
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Laverania)
Location:
chromosome: 10
Exon count:
2
Sequence:
Chromosome: 10; NC_004314.2 (28491..36165)

Chromosome 10 - NC_004314.2Genomic Context describing neighboring genes Neighboring gene rifin Neighboring gene rifin

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Malaria, organism-specific biosystem (from KEGG)
    Malaria, organism-specific biosystemPlasmodium protozoa are parasites that account for malaria infection. Sporozoite forms of the parasite are injected by mosquito bites under the skin and are carried to the liver where they develop in...
  • Malaria, conserved biosystem (from KEGG)
    Malaria, conserved biosystemPlasmodium protozoa are parasites that account for malaria infection. Sporozoite forms of the parasite are injected by mosquito bites under the skin and are carried to the liver where they develop in...
Names
erythrocyte membrane protein 1, PfEMP1

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004314.2 

    Range
    28491..36165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001347252.1XP_001347288.1  erythrocyte membrane protein 1, PfEMP1 [Plasmodium falciparum 3D7]

    See proteins identical to XP_001347288.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q8IK37
    Conserved Domains (4) summary
    pfam03011
    Location:634808
    Blast Score: 345
    PFEMP; PFEMP DBL domain
    pfam05424
    Location:121313
    Blast Score: 578
    Duffy_binding; Duffy binding domain
    pfam15445
    Location:17822241
    Blast Score: 1799
    ATS; acidic terminal segments, variant surface antigen of PfEMP1
    pfam15447
    Location:1854
    Blast Score: 143
    NTS; N-terminal segments of PfEMP1