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Trpm Transient receptor potential cation channel, subfamily M ortholog [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36694, updated on 22-Apr-2015
Official Symbol
Trpmprovided by FlyBase
Official Full Name
Transient receptor potential cation channel, subfamily M orthologprovided by FlyBase
Primary source
FLYBASE:FBgn0265194
Locus tag
Dmel_CG44240
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:GH04950; CG16805; CG30078; CG30079; CG34123; CG34187; CG44240; Dmel\CG44240; DmTRPM; dTRPM; trpm; TrpM; TRPM
Old locus tag
Dmel_CG34123
See Trpm in MapViewer
Location:
51E11-51F4
Exon count:
41
Annotation release Status Assembly Chr Location
Release 6.01 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (15262808..15309368, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (11150313..11196873, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Follistatin Neighboring gene Integrin alphaPS4 subunit Neighboring gene scab Neighboring gene ncRNA Neighboring gene CG8102 gene product from transcript CG8102-RB Neighboring gene CG8152 gene product from transcript CG8152-RA Neighboring gene mutagen-sensitive 210 Neighboring gene CG8155 gene product from transcript CG8155-RA

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
cell growth IMP
Inferred from Mutant Phenotype
more info
PubMed 
divalent metal ion transport IDA
Inferred from Direct Assay
more info
PubMed 
magnesium ion homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
mitochondrion organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
NOT thermotaxis IMP
Inferred from Mutant Phenotype
more info
PubMed 
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
zinc ion homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cation channel complex IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
CG44240 gene product from transcript CG44240-RA
Names
CG44240-PA
CG44240-PB
CG44240-PD
CG44240-PE
CG44240-PF
CG44240-PG
CG44240-PH
CG44240-PI
CG44240-PJ
Trpm-PA
Trpm-PB
Trpm-PD
Trpm-PE
Trpm-PF
Trpm-PG
Trpm-PH
Trpm-PI
Trpm-PJ
transient receptor potential cation channel, subfamily M ortholog
transient receptor potential channel M

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    15262808..15309368
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001144200.2NP_001137672.2  transient receptor potential cation channel, subfamily M ortholog, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137672.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7YZH4
    Related
    FBpp0308220, FBtr0339074
    Conserved Domains (2) summary
    pfam03546
    Location:16581933
    Treacle; Treacher Collins syndrome protein Treacle
    pfam00520
    Location:8751073
    Ion_trans; Ion transport protein
  2. NM_001299517.1NP_001286446.1  transient receptor potential cation channel, subfamily M ortholog, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286446.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4LGJ2
    Related
    FBpp0308226, FBtr0339080
    Conserved Domains (2) summary
    pfam03546
    Location:16871962
    Treacle; Treacher Collins syndrome protein Treacle
    pfam00520
    Location:9041102
    Ion_trans; Ion transport protein
  3. NM_001144201.2NP_001137673.1  transient receptor potential cation channel, subfamily M ortholog, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137673.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7YZH3
    Related
    FBpp0308225, FBtr0339079
    Conserved Domains (2) summary
    pfam03546
    Location:16471922
    Treacle; Treacher Collins syndrome protein Treacle
    pfam00520
    Location:8641062
    Ion_trans; Ion transport protein
  4. NM_001299518.1NP_001286447.1  transient receptor potential cation channel, subfamily M ortholog, isoform I [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286447.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4LFE7
    Related
    FBpp0308227, FBtr0339081
    Conserved Domains (2) summary
    pfam03546
    Location:16721947
    Treacle; Treacher Collins syndrome protein Treacle
    pfam00520
    Location:8891087
    Ion_trans; Ion transport protein
  5. NM_001299519.1NP_001286448.1  transient receptor potential cation channel, subfamily M ortholog, isoform J [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286448.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4LF73
    Related
    FBpp0308228, FBtr0339082
    Conserved Domains (2) summary
    pfam03546
    Location:15751850
    Treacle; Treacher Collins syndrome protein Treacle
    pfam00520
    Location:8381036
    Ion_trans; Ion transport protein
  6. NM_001043084.2NP_001036549.1  transient receptor potential cation channel, subfamily M ortholog, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036549.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8DYE2
    Related
    FBpp0308222, FBtr0339076
    Conserved Domains (2) summary
    pfam03546
    Location:16401915
    Treacle; Treacher Collins syndrome protein Treacle
    pfam00520
    Location:8571055
    Ion_trans; Ion transport protein
  7. NM_001043085.2NP_001036550.2  transient receptor potential cation channel, subfamily M ortholog, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036550.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8DYE2
    Related
    FBpp0308224, FBtr0339078
    Conserved Domains (1) summary
    pfam03546
    Location:17151990
    Treacle; Treacher Collins syndrome protein Treacle
  8. NM_001103850.2NP_001097320.1  transient receptor potential cation channel, subfamily M ortholog, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097320.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8DYE2
    Related
    FBpp0308223, FBtr0339077
    Conserved Domains (2) summary
    pfam03546
    Location:17422017
    Treacle; Treacher Collins syndrome protein Treacle
    pfam00520
    Location:9591157
    Ion_trans; Ion transport protein
  9. NM_001043083.2NP_001036548.1  transient receptor potential cation channel, subfamily M ortholog, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036548.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8DYE2
    Related
    FBpp0308221, FBtr0339075
    Conserved Domains (1) summary
    pfam00520
    Location:8571055
    Ion_trans; Ion transport protein