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Zscan4c zinc finger and SCAN domain containing 4C [ Mus musculus (house mouse) ]

Gene ID: 245109, updated on 11-Apr-2015
Official Symbol
Zscan4cprovided by MGI
Official Full Name
zinc finger and SCAN domain containing 4Cprovided by MGI
Primary source
MGI:MGI:2685243
See related
Ensembl:ENSMUSG00000054272; Vega:OTTMUSG00000032953
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm397; Zscan4d; XM_142517
See Zscan4c in MapViewer
Location:
7; 7 A1
Exon count:
4
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 7 NC_000073.6 (11005745..11010547)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (11591094..11595896)

Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene predicted pseudogene 7789 Neighboring gene zinc finger protein 84 pseudogene Neighboring gene zinc finger and SCAN domain containing 4, pseudogene 1 Neighboring gene predicted gene, 33601

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Gene Ontology Provided by MGI

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
RNA polymerase II regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
contributes_to sequence-specific DNA binding RNA polymerase II transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
sequence-specific DNA binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
chromosome IEA
Inferred from Electronic Annotation
more info
 
chromosome, telomeric region IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
nuclear chromosome, telomeric region IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
zinc finger and SCAN domain containing protein 4C
Names
zinc finger and SCAN domain containing protein 4C

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013765.2NP_001013787.1  zinc finger and SCAN domain containing protein 4C

    See identical proteins and their annotated locations for NP_001013787.1

    Status: PROVISIONAL

    Source sequence(s)
    AC166368
    Consensus CDS
    CCDS52012.1
    UniProtKB/Swiss-Prot
    Q80VJ6
    Related
    ENSMUSP00000118506, OTTMUSP00000044032, ENSMUST00000131379, OTTMUST00000082167
    Conserved Domains (2) summary
    pfam13465
    Location:438463
    zf-H2C2_2; Zinc-finger double domain
    cl02605
    Location:51117
    SCAN; SCAN oligomerization domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000073.6 Reference GRCm38.p3 C57BL/6J

    Range
    11005745..11010547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)