Format

Send to:

Choose Destination

Links from PubMed

    • Showing Current items.

    Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 74068, updated on 17-Sep-2016
    Official Symbol
    Asz1provided by MGI
    Official Full Name
    ankyrin repeat, SAM and basic leucine zipper domain containing 1provided by MGI
    Primary source
    MGI:MGI:1921318
    See related
    Ensembl:ENSMUSG00000010796 Vega:OTTMUSG00000023407
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gasz; ORF3; 4933400N19Rik
    Orthologs
    Location:
    6; 6 A2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 6 NC_000072.6 (18050964..18109061, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (18000964..18059061, complement)

    Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene metal response element binding transcription factor 2 pseudogene Neighboring gene suppression of tumorigenicity 7 Neighboring gene wingless-type MMTV integration site family, member 2 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene NSA2 ribosome biogenesis homolog pseudogene

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    signal transducer activity NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    DNA methylation involved in gamete generation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    gene silencing by RNA IEA
    Inferred from Electronic Annotation
    more info
     
    germ cell development NAS
    Non-traceable Author Statement
    more info
    PubMed 
    male meiosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    meiotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    piRNA metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    pi-body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1
    Names
    asz1
    germ cell-specific ankyrin, SAM and basic leucine zipper domain containing protein

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023729.3NP_076218.3  ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1

      See identical proteins and their annotated locations for NP_076218.3

      Status: VALIDATED

      Source sequence(s)
      AF459789, BB020038, BC058859, BG088136
      Consensus CDS
      CCDS19929.1
      UniProtKB/Swiss-Prot
      Q8VD46
      Related
      ENSMUSP00000010940, OTTMUSP00000027375, ENSMUST00000010940, OTTMUST00000056859
      Conserved Domains (6) summary
      cd09521
      Location:273333
      SAM_ASZ1; SAM domain of ASZ1 subfamily
      cd00204
      Location:77202
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:83179
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:4799
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:168222
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:151179
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000072.6 Reference GRCm38.p4 C57BL/6J

      Range
      18050964..18109061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006505176.3XP_006505239.1  

      See identical proteins and their annotated locations for XP_006505239.1

      Conserved Domains (4) summary
      cd09521
      Location:124184
      SAM_ASZ1; SAM domain of ASZ1 subfamily
      cd00204
      Location:185
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:153
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:230
      ANK; ANK repeat [structural motif]
    2. XM_006505178.3XP_006505241.1  

      See identical proteins and their annotated locations for XP_006505241.1

      Conserved Domains (4) summary
      cd09521
      Location:124184
      SAM_ASZ1; SAM domain of ASZ1 subfamily
      cd00204
      Location:185
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:153
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:230
      ANK; ANK repeat [structural motif]
    Support Center