Display Settings:

Format

Send to:

Choose Destination

EMB93 transcription termination factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814834, updated on 27-Sep-2014
Gene symbol
EMB93
Gene description
transcription termination factor family protein
Primary source
TAIR:AT2G03050
Locus tag
AT2G03050
Gene type
protein coding
RNA name
transcription termination factor family protein
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
EMBRYO DEFECTIVE 93; SINGLET OXYGEN-LINKED DEATH ACTIVATOR 10; SOLDAT10; T17M13.22; T17M13_22
Summary
A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
See EMB93 in MapViewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (899690..900946, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Toll-Interleukin-Resistance domain-containing protein Neighboring gene emp24/gp25L/p24 family/GOLD domain-containing protein Neighboring gene protein agamous-like 30 Neighboring gene mediator subunit 8

NM_126357.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
cellular response to singlet oxygen IGI
Inferred from Genetic Interaction
more info
PubMed 
embryo development ending in seed dormancy IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
chloroplast IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion ISM
Inferred from Sequence Model
more info
 
Names
transcription termination factor family protein
NP_178405.2
  • EMBRYO DEFECTIVE 93 (EMB93); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular response to singlet oxygen, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 

    Range
    899690..900946
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126357.2NP_178405.2  transcription termination factor family protein [Arabidopsis thaliana]

    See proteins identical to NP_178405.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q84X53
    Conserved Domains (1) summary
    cl19765
    Location:1270
    mTERF; mTERF