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    Slitrk1 SLIT and NTRK-like family, member 1 [ Mus musculus (house mouse) ]

    Gene ID: 76965, updated on 24-Jun-2016
    Official Symbol
    Slitrk1provided by MGI
    Official Full Name
    SLIT and NTRK-like family, member 1provided by MGI
    Primary source
    MGI:MGI:2679446
    See related
    Ensembl:ENSMUSG00000075478
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    3200001I04Rik
    Orthologs
    Location:
    14; 14 E3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (108909988..108914239, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (109309205..109313456, complement)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene ribosomal protein L27A, pseudogene 2 Neighboring gene predicted gene, 30157 Neighboring gene predicted gene, 30216 Neighboring gene heterogeneous nuclear ribonucleoprotein D-like pseudogene

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    adult behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    axonogenesis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    homeostatic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    multicellular organism growth IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    nervous system development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of synapse assembly IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    integral component of membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    SLIT and NTRK-like protein 1
    Names
    slit and trk like gene 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199065.2NP_951020.1  SLIT and NTRK-like protein 1 precursor

      See identical proteins and their annotated locations for NP_951020.1

      Status: VALIDATED

      Source sequence(s)
      AK173296, BE956915, CO430912
      Consensus CDS
      CCDS27325.1
      UniProtKB/Swiss-Prot
      Q810C1
      UniProtKB/TrEMBL
      B2RXM1, Q69Z70
      Related
      ENSMUSP00000097897, ENSMUST00000100322
      Conserved Domains (3) summary
      smart00082
      Location:212250
      LRRCT; Leucine rich repeat C-terminal domain
      pfam13855
      Location:132189
      LRR_8; Leucine rich repeat
      sd00033
      Location:6283
      LRR_RI; leucine-rich repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      108909988..108914239 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)