Display Settings:

Format

Send to:

Choose Destination

Ifi27l2a interferon, alpha-inducible protein 27 like 2A [ Mus musculus (house mouse) ]

Gene ID: 76933, updated on 24-Jan-2015
Official Symbol
Ifi27l2aprovided by MGI
Official Full Name
interferon, alpha-inducible protein 27 like 2Aprovided by MGI
Primary source
MGI:MGI:1924183
See related
Ensembl:ENSMUSG00000079017; Vega:OTTMUSG00000021961
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ifi27; Isg12; Isg12(b1); 2310061N23Rik
Orthologs
See Ifi27l2a in MapViewer
Location:
12 E; 12
Exon count:
5
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 12 NC_000078.6 (103433873..103443680, complement)

Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene OTU domain, ubiquitin aldehyde binding 2 Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 Neighboring gene interferon, alpha-inducible protein 27 Neighboring gene interferon, alpha-inducible protein 27 like 2B Neighboring gene predicted gene, 30947

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
aging IDA
Inferred from Direct Assay
more info
PubMed 
response to virus IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
interferon alpha-inducible protein 27-like protein 2A
Names
interferon alpha-inducible protein 27-like protein 2A
interferon stimulated gene 12(b1)
interferon-stimulated gene 12 protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001281830.1NP_001268759.1  interferon alpha-inducible protein 27-like protein 2A isoform 2 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon and contains an alternate 3' exon, resulting in a distinct 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AC154347, AK040279
    Conserved Domains (1) summary
    pfam06140
    Location:967
    Ifi-6-16; Interferon-induced 6-16 family
  2. NM_029803.3NP_084079.1  interferon alpha-inducible protein 27-like protein 2A isoform 1 precursor

    See proteins identical to NP_084079.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the shorter transcript and encodes the longer isoform (1).
    Source sequence(s)
    AC154347, AK160503
    Consensus CDS
    CCDS49153.1
    UniProtKB/Swiss-Prot
    Q8R412
    Related
    ENSMUSP00000054698, OTTMUSP00000024659, ENSMUST00000055071, OTTMUST00000052136
    Conserved Domains (1) summary
    pfam06140
    Location:976
    Ifi-6-16; Interferon-induced 6-16 family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000078.6 

    Range
    103433873..103443680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000034.1 

    Range
    104650630..104660441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)