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RAB11FIP5 RAB11 family interacting protein 5 (class I) [ Homo sapiens (human) ]

Gene ID: 26056, updated on 7-Aug-2014
Official Symbol
RAB11FIP5provided by HGNC
Official Full Name
RAB11 family interacting protein 5 (class I)provided by HGNC
Primary source
HGNC:24845
See related
Ensembl:ENSG00000135631; HPRD:16117; MIM:605536; Vega:OTTHUMG00000129779
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GAF1; pp75; RIP11
See RAB11FIP5 in Epigenomics, MapViewer
Location:
2p13
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCh38 (GCF_000001405.26) 2 NC_000002.12 (73073382..73113018, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (73300510..73340146, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene empty spiracles homeobox 1 Neighboring gene uncharacterized LOC101927803 Neighboring gene sideroflexin 5 Neighboring gene notochord homeobox Neighboring gene SMYD family member 5

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Endocytosis, organism-specific biosystem (from KEGG)
    Endocytosis, organism-specific biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
  • Endocytosis, conserved biosystem (from KEGG)
    Endocytosis, conserved biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • KIAA0857, DKFZp434H018

Gene Ontology Provided by GOA

Function Evidence Code Pubs
gamma-tubulin binding IDA
Inferred from Direct Assay
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
cellular response to acidity IDA
Inferred from Direct Assay
more info
 
insulin secretion involved in cellular response to glucose stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 
protein transport IEA
Inferred from Electronic Annotation
more info
 
regulated secretory pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of protein localization to cell surface IMP
Inferred from Mutant Phenotype
more info
 
Component Evidence Code Pubs
Golgi apparatus ISS
Inferred from Sequence or Structural Similarity
more info
 
Golgi membrane IEA
Inferred from Electronic Annotation
more info
 
early endosome ISS
Inferred from Sequence or Structural Similarity
more info
 
early endosome membrane IEA
Inferred from Electronic Annotation
more info
 
intracellular membrane-bounded organelle IDA
Inferred from Direct Assay
more info
 
microtubule organizing center IDA
Inferred from Direct Assay
more info
 
mitochondrial outer membrane IDA
Inferred from Direct Assay
more info
PubMed 
recycling endosome ISS
Inferred from Sequence or Structural Similarity
more info
 
recycling endosome membrane IEA
Inferred from Electronic Annotation
more info
 
secretory granule ISS
Inferred from Sequence or Structural Similarity
more info
 
transport vesicle membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
rab11 family-interacting protein 5
Names
rab11 family-interacting protein 5
gaf-1
rab11-FIP5
phosphoprotein pp75
gamma-SNAP-associated factor 1
rab11-interacting protein Rip11

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015470.2NP_056285.1  rab11 family-interacting protein 5

    See proteins identical to NP_056285.1

    Status: VALIDATED

    Source sequence(s)
    AB020664, AC010913, AL117579
    Consensus CDS
    CCDS1923.1
    UniProtKB/Swiss-Prot
    Q9BXF6
    UniProtKB/TrEMBL
    Q9UFM0
    Related
    ENSP00000258098, OTTHUMP00000160201, ENST00000258098, OTTHUMT00000251995
    Conserved Domains (2) summary
    pfam09457
    Location:601648
    Blast Score: 209
    RBD-FIP; FIP domain
    cl14603
    Location:21167
    Blast Score: 430
    C2; C2 domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000002.12 

    Range
    73073382..73113018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005264252.1XP_005264309.1  

    Conserved Domains (2) summary
    pfam09457
    Location:12721319
    Blast Score: 213
    RBD-FIP; FIP domain
    cl14603
    Location:21167
    Blast Score: 436
    C2; C2 domain
  2. XM_005264251.1XP_005264308.1  

    Conserved Domains (2) summary
    pfam09457
    Location:11661213
    Blast Score: 213
    RBD-FIP; FIP domain
    cl14603
    Location:21167
    Blast Score: 436
    C2; C2 domain
  3. XM_006711985.1XP_006712048.1  

    Conserved Domains (2) summary
    pfam09457
    Location:11971244
    Blast Score: 213
    RBD-FIP; FIP domain
    cl14603
    Location:21167
    Blast Score: 436
    C2; C2 domain
  4. XM_005264253.2XP_005264310.1  

    Conserved Domains (1) summary
    cl14603
    Location:21167
    Blast Score: 429
    C2; C2 domain

Alternate HuRef

Genomic

  1. AC_000134.1 

    Range
    73036069..73075705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018913.2 

    Range
    73230985..73270631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)