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    ffh Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947102, updated on 26-Jun-2015
    Gene symbol
    ffh
    Gene description
    Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
    Primary source
    EcoGene:EG10300
    Locus tag
    b2610
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2607; JW5414
    Summary
    Binds nascent signal peptides, GTP and 4.5S RNA. [More information is available at EcoGene: EG10300].
    Sequence:
    NC_000913.3 (2746434..2747795, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribosome maturation factor Neighboring gene 30S ribosomal subunit protein S16 Neighboring gene cytochrome c assembly protein family inner membrane protein Neighboring gene UPF0053 family inner membrane protein

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    • Bacterial secretion system, organism-specific biosystem (from KEGG)
      Bacterial secretion system, organism-specific biosystemGram-negative bacteria secrete a wide range of proteins whose functions include biogenesis of organelles, such as pilli and flagella, nutrient acquisition, virulence, and efflux of drugs and other to...
    • Bacterial secretion system, conserved biosystem (from KEGG)
      Bacterial secretion system, conserved biosystemGram-negative bacteria secrete a wide range of proteins whose functions include biogenesis of organelles, such as pilli and flagella, nutrient acquisition, virulence, and efflux of drugs and other to...
    • Protein export, organism-specific biosystem (from KEGG)
      Protein export, organism-specific biosystemThe protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the ge...
    • Protein export, conserved biosystem (from KEGG)
      Protein export, conserved biosystemThe protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the ge...
    • Sec (secretion) system, organism-specific biosystem (from KEGG)
      Sec (secretion) system, organism-specific biosystemStructural complex; Environmental information processing; Bacterial secretion system
    • Sec (secretion) system, conserved biosystem (from KEGG)
      Sec (secretion) system, conserved biosystemStructural complex; Environmental information processing; Bacterial secretion system
    Products Interactant Other Gene Complex Source Pubs Description
    Names
    Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
    NP_417101.1
    • GTP-binding export factor binds to signal sequence, GTP and RNA

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2746434..2747795
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417101.1 Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417101.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P0AGD7
      Conserved Domains (4) summary
      smart00963
      Location:986
      SRP54_N; SRP54-type protein, helical bundle domain
      PRK10867
      Location:1425
      PRK10867; signal recognition particle protein; Provisional
      cd03115
      Location:101274
      SRP; The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal sighnal sequences of newly synthesized polypeptides at the ribosome. The ...
      pfam02978
      Location:329425
      SRP_SPB; Signal peptide binding domain