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    ticam1 toll-like receptor adaptor molecule 1 [ Danio rerio (zebrafish) ]

    Gene ID: 403147, updated on 25-Jul-2015
    Official Symbol
    ticam1provided by ZNC
    Official Full Name
    toll-like receptor adaptor molecule 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040219-2
    See related
    Ensembl:ENSDARG00000102493; Vega:OTTDARG00000041952
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    trif
    See ticam1 in MapViewer
    Location:
    chromosome: 22
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current GRCz10 (GCF_000002035.5) 22 NC_007133.6 (3989625..3992985)
    103 previous assembly Zv9 (GCF_000002035.4) 22 NC_007133.5 (3850516..3853876, complement)

    Chromosome 22 - NC_007133.6Genomic Context describing neighboring genes Neighboring gene lysine (K)-specific demethylase 4B Neighboring gene ubiquitin-like with PHD and ring finger domains 1 Neighboring gene translocase of inner mitochondrial membrane 44 homolog (yeast) Neighboring gene fibrillin 2b

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    positive regulation of I-kappaB kinase/NF-kappaB signaling IDA
    Inferred from Direct Assay
    more info
    PubMed 
    positive regulation of interferon-beta biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    TIR domain-containing adapter molecule 1
    Names
    TIR domain containing adaptor inducing interferon-beta
    TIR-domain containing adaptor inducing IFN-beta
    TRIF/TICAM1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001044759.1NP_001038224.1  TIR domain-containing adapter molecule 1

      See identical proteins and their annotated locations for NP_001038224.1

      Status: PROVISIONAL

      Source sequence(s)
      BX927276
      UniProtKB/TrEMBL
      Q1LUQ2
      Related
      ENSDARP00000130000, OTTDARP00000014705, ENSDART00000170751, OTTDART00000017376
      Conserved Domains (1) summary
      cl22869
      Location:322386
      TIR_2; TIR domain

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz10 Primary Assembly

    Genomic

    1. NC_007133.6 Reference GRCz10 Primary Assembly

      Range
      3989625..3992985
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)