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Aspscr1 alveolar soft part sarcoma chromosome region, candidate 1 (human) [ Mus musculus (house mouse) ]

Gene ID: 68938, updated on 17-Mar-2015
Official Symbol
Aspscr1provided by MGI
Official Full Name
alveolar soft part sarcoma chromosome region, candidate 1 (human)provided by MGI
Primary source
MGI:MGI:1916188
See related
Ensembl:ENSMUSG00000025142; Vega:OTTMUSG00000004078
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
TUG; ASPC; ASPL; ASPS; RCC17; ASPCR1; 1190006K01Rik
Orthologs
See Aspscr1 in MapViewer
Location:
11; 11 E2
Exon count:
18
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 11 NC_000077.6 (120672439..120709447)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (120534287..120570761)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene myeloid-associated differentiation marker-like 2 Neighboring gene notum pectinacetylesterase homolog (Drosophila) Neighboring gene stimulated by retinoic acid 13 Neighboring gene leucine rich repeat containing 45

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
glucose homeostasis IDA
Inferred from Direct Assay
more info
PubMed 
intracellular protein transport IDA
Inferred from Direct Assay
more info
PubMed 
regulation of glucose import IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoplasmic side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
extrinsic component of membrane IDA
Inferred from Direct Assay
more info
PubMed 
intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 
vesicle membrane IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
tether containing UBX domain for GLUT4
Names
tether containing UBX domain for GLUT4
alveolar soft part sarcoma chromosomal region candidate gene 1 protein homolog
tether, containing a UBX domain, for GLUT4

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164224.1NP_001157696.1  tether containing UBX domain for GLUT4 isoform 3

    See identical proteins and their annotated locations for NP_001157696.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) represents use of an alternate promoter and 5' UTR, uses a downstream start codon, and lacks an alternate in-frame exon in the central coding region, compared to variant 1. The resulting isoform (3) has a shorter N-terminus and lacks an internal segment, compared to isoform 1.
    Source sequence(s)
    AK146061, AY349132
    Consensus CDS
    CCDS49008.1
    UniProtKB/Swiss-Prot
    Q8VBT9
    Related
    ENSMUSP00000101766, OTTMUSP00000051980, ENSMUST00000106160, OTTMUST00000093614
  2. NM_026877.2NP_081153.1  tether containing UBX domain for GLUT4 isoform 1

    See identical proteins and their annotated locations for NP_081153.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1), also known as the long isoform.
    Source sequence(s)
    AY349133, CJ088693
    Consensus CDS
    CCDS25751.1
    UniProtKB/Swiss-Prot
    Q8VBT9
    Related
    ENSMUSP00000026135, OTTMUSP00000004448, ENSMUST00000026135, OTTMUST00000009139
    Conserved Domains (2) summary
    pfam11470
    Location:1478
    TUG-UBL1; GLUT4 regulating protein TUG
    cl00155
    Location:385456
    UBQ; Ubiquitin-like proteins
  3. NM_198223.2NP_937866.1  tether containing UBX domain for GLUT4 isoform 2

    See identical proteins and their annotated locations for NP_937866.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) represents use of an alternate promoter and 5' UTR and uses a downstream start codon, compared to variant 1. The resulting isoform (2), also known as the short isoform, has a shorter N-terminus, compared to isoform 1.
    Source sequence(s)
    AK146061, AY349132
    Consensus CDS
    CCDS25752.1
    UniProtKB/Swiss-Prot
    Q8VBT9
    Related
    ENSMUSP00000101765, ENSMUST00000106159
    Conserved Domains (1) summary
    cl00155
    Location:308379
    UBQ; Ubiquitin-like proteins

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p3 C57BL/6J

    Range
    120672439..120709447
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006534085.1XP_006534148.1  

    Conserved Domains (1) summary
    pfam11470
    Location:1478
    TUG-UBL1; GLUT4 regulating protein TUG
  2. XM_006534084.1XP_006534147.1  

    Conserved Domains (2) summary
    pfam11470
    Location:2063
    TUG-UBL1; GLUT4 regulating protein TUG
    cl00155
    Location:370441
    UBQ; Ubiquitin-like proteins
  3. XM_006534086.2XP_006534149.1  

    See identical proteins and their annotated locations for XP_006534149.1

    UniProtKB/Swiss-Prot
    Q8VBT9
    Conserved Domains (1) summary
    cl00155
    Location:308379
    UBQ; Ubiquitin-like proteins
  4. XM_006534087.2XP_006534150.1  

    See identical proteins and their annotated locations for XP_006534150.1

    UniProtKB/Swiss-Prot
    Q8VBT9
    Conserved Domains (1) summary
    cl00155
    Location:308379
    UBQ; Ubiquitin-like proteins

Alternate Mm_Celera

Genomic

  1. AC_000033.1 Alternate Mm_Celera

    Range
    132408410..132444905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)