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    Dynlt1 dynein light chain Tctex-type 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 83462, updated on 8-Aug-2016
    Official Symbol
    Dynlt1provided by RGD
    Official Full Name
    dynein light chain Tctex-type 1provided by RGD
    Primary source
    RGD:620261
    See related
    Ensembl:ENSRNOG00000018207
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
    Also known as
    AGS2; Tctex1
    Summary
    mediates vesicle transport from early to late endosomes in cooperation with dynein [RGD, Feb 2006]
    Orthologs
    Location:
    1q11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (47206892..47213785, complement)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 1 NC_005100.3 (48510103..48516996, complement)

    Chromosome 1 - NC_005100.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102551377 Neighboring gene tubby like protein 4 Neighboring gene transmembrane protein 181 Neighboring gene synaptotagmin-like 3 Neighboring gene ezrin

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    motor activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    cell division IEA
    Inferred from Electronic Annotation
    more info
     
    establishment of mitotic spindle orientation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    intracellular protein transport TAS
    Traceable Author Statement
    more info
    PubMed 
    intracellular transport of viral protein in host cell IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular transport of viral protein in host cell ISO
    Inferred from Sequence Orthology
    more info
     
    mitotic nuclear division IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of neurogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    neuron projection morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of G-protein coupled receptor protein signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    regulation of GTPase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of cytoskeleton organization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasmic dynein complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cytoplasmic dynein complex TAS
    Traceable Author Statement
    more info
    PubMed 
    cytoplasmic microtubule ISO
    Inferred from Sequence Orthology
    more info
     
    host cell IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular IEA
    Inferred from Electronic Annotation
    more info
     
    microtubule IEA
    Inferred from Electronic Annotation
    more info
     
    secretory vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    spindle IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    dynein light chain Tctex-type 1
    Names
    T-complex testis-specific protein 1 homolog
    activator of G-protein signaling 2
    t-complex testis expressed 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_031318.1NP_112608.1  dynein light chain Tctex-type 1

      See identical proteins and their annotated locations for NP_112608.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ131437
      UniProtKB/Swiss-Prot
      Q9Z336
      UniProtKB/TrEMBL
      B2RYR9
      Related
      ENSRNOP00000024656, ENSRNOT00000024656
      Conserved Domains (1) summary
      pfam03645
      Location:14113
      Tctex-1; Tctex-1 family

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005100.4 Reference Rnor_6.0 Primary Assembly

      Range
      47206892..47213785 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006227901.3XP_006227963.1  

      Conserved Domains (1) summary
      pfam03645
      Location:1491
      Tctex-1; Tctex-1 family

    Alternate Rn_Celera

    Genomic

    1. AC_000069.1 Alternate Rn_Celera

      Range
      42574662..42581485 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)