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    Fuca1 fucosidase, alpha-L- 1, tissue [ Rattus norvegicus (Norway rat) ]

    Gene ID: 24375, updated on 30-Jun-2015
    Official Symbol
    Fuca1provided by RGD
    Official Full Name
    fucosidase, alpha-L- 1, tissueprovided by RGD
    Primary source
    RGD:2636
    See related
    Ensembl:ENSRNOG00000009325
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Fuca
    Summary
    catalyzes the hydrolysis of an alpha-L-fucoside to an L-fucose [RGD, Feb 2006]
    Orthologs
    See Fuca1 in MapViewer
    Location:
    5q36
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    105 current Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (154269296..154286545)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 5 NC_005104.3 (158034147..158051397)

    Chromosome 5 - NC_005104.4Genomic Context describing neighboring genes Neighboring gene proline-rich nuclear receptor coactivator 2 Neighboring gene cannabinoid receptor 2 (macrophage) Neighboring gene 3-hydroxymethyl-3-methylglutaryl-CoA lyase Neighboring gene UDP-galactose-4-epimerase

    • Nitrogen metabolism, organism-specific biosystem (from KEGG)
      Nitrogen metabolism, organism-specific biosystemThe biological process of the nitrogen cycle is a complex interplay among many microorganisms catalyzing different reactions, where nitrogen is found in various oxidation states ranging from +5 in ni...
    • Nitrogen metabolism, organism-specific biosystem (from KEGG)
      Nitrogen metabolism, organism-specific biosystemThe biological process of the nitrogen cycle is a complex interplay among many microorganisms catalyzing different reactions, where nitrogen is found in various oxidation states ranging from +5 in ni...
    • Nitrogen metabolism, organism-specific biosystem (from KEGG)
      Nitrogen metabolism, organism-specific biosystemThe biological process of the nitrogen cycle is a complex interplay among many microorganisms catalyzing different reactions, where nitrogen is found in various oxidation states ranging from +5 in ni...
    • Nitrogen metabolism, organism-specific biosystem (from KEGG)
      Nitrogen metabolism, organism-specific biosystemThe biological process of the nitrogen cycle is a complex interplay among many microorganisms catalyzing different reactions, where nitrogen is found in various oxidation states ranging from +5 in ni...

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    alpha-L-fucosidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    alpha-L-fucosidase activity NAS
    Non-traceable Author Statement
    more info
    PubMed 
    carbohydrate binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    fucosidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    fucose metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    fucose metabolic process NAS
    Non-traceable Author Statement
    more info
    PubMed 
    glycoside catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    glycoside catabolic process NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    extracellular exosome ISO
    Inferred from Sequence Orthology
    more info
     
    lysosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    tissue alpha-L-fucosidase
    Names
    tissue alpha-L-fucosidase
    Fucosidase alpha-L-1 tissue
    Fucosidase, alpha-L-1, tissue
    alpha-L-fucosidase 1
    alpha-L-fucosidase I
    alpha-L-fucoside fucohydrolase 1
    NP_036694.2

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_012562.2NP_036694.2  tissue alpha-L-fucosidase precursor

      See identical proteins and their annotated locations for NP_036694.2

      Status: PROVISIONAL

      Source sequence(s)
      BC081844
      UniProtKB/Swiss-Prot
      P17164
      Related
      ENSRNOP00000012455, ENSRNOT00000012455
      Conserved Domains (2) summary
      smart00812
      Location:27409
      Alpha_L_fucos; Alpha-L-fucosidase
      COG3669
      Location:59402
      COG3669; Alpha-L-fucosidase [Carbohydrate transport and metabolism]

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005104.4 Reference Rnor_6.0 Primary Assembly

      Range
      154269296..154286545
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Rn_Celera

    Genomic

    1. AC_000073.1 Alternate Rn_Celera

      Range
      146559858..146577113
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)