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Tox thymocyte selection-associated high mobility group box [ Mus musculus (house mouse) ]

Gene ID: 252838, updated on 16-Dec-2014
Official Symbol
Toxprovided by MGI
Official Full Name
thymocyte selection-associated high mobility group boxprovided by MGI
Primary source
MGI:MGI:2181659
Locus tag
RP23-395P16.1
See related
Ensembl:ENSMUSG00000041272; Vega:OTTMUSG00000004332
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700007F02Rik
Location:
4 A1; 4
Exon count:
11
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 4 NC_000070.6 (6686353..6991552, complement)

Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene syndecan binding protein Neighboring gene neutral sphingomyelinase (N-SMase) activation associated factor Neighboring gene Friend virus susceptibility protein 1-like Neighboring gene predicted gene 11802 Neighboring gene predicted gene, 33462 Neighboring gene predicted gene, 33539

Markers

Homology

Clone Names

  • KIAA0808

Gene Ontology Provided by MGI

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
chromatin remodeling IBA
Inferred from Biological aspect of Ancestor
more info
 
regulation of transcription, DNA-templated IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
Preferred Names
thymocyte selection-associated high mobility group box protein TOX
Names
thymocyte selection-associated high mobility group box protein TOX
thymocyte selection-associated HMG box
thymus high mobility group box protein TOX

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145711.4NP_663757.3  thymocyte selection-associated high mobility group box protein TOX

    See proteins identical to NP_663757.3

    Status: VALIDATED

    Source sequence(s)
    AK038671, AK161578, BY240192
    Consensus CDS
    CCDS17953.1
    UniProtKB/Swiss-Prot
    Q66JW3
    Conserved Domains (1) summary
    cd00084
    Location:261310
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000070.6 

    Range
    6686353..6991552
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006537945.1XP_006538008.1  

    See proteins identical to XP_006538008.1

    UniProtKB/Swiss-Prot
    Q66JW3
    Conserved Domains (1) summary
    cd00084
    Location:261310
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
  2. XM_006537944.1XP_006538007.1  

    See proteins identical to XP_006538007.1

    UniProtKB/Swiss-Prot
    Q66JW3
    Related
    ENSMUSP00000037966, OTTMUSP00000004712, ENSMUST00000039987, OTTMUST00000009810
    Conserved Domains (1) summary
    cd00084
    Location:261310
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...

Alternate Mm_Celera

Genomic

  1. AC_000026.1 

    Range
    6590011..6893060
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)