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Plin5 perilipin 5 [ Rattus norvegicus (Norway rat) ]

Gene ID: 501283, updated on 24-Jan-2015
Official Symbol
Plin5provided by RGD
Official Full Name
perilipin 5provided by RGD
Primary source
RGD:1589602
See related
Ensembl:ENSRNOG00000047860
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Also known as
Oxpat
Orthologs
See Plin5 in MapViewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (10956013..10961782)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 9 NC_005108.3 (9943003..9948729)

Chromosome 9 - NC_005108.4Genomic Context describing neighboring genes Neighboring gene sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B Neighboring gene leucine-rich alpha-2-glycoprotein 1 Neighboring gene perilipin 4 Neighboring gene hepatoma-derived growth factor-related protein 2 Neighboring gene UBX domain protein 6

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
identical protein binding IEA
Inferred from Electronic Annotation
more info
 
identical protein binding ISO
Inferred from Sequence Orthology
more info
 
lipase binding IPI
Inferred from Physical Interaction
more info
PubMed 
lipase binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
lipid particle organization ISO
Inferred from Sequence Orthology
more info
 
lipid particle organization ISS
Inferred from Sequence or Structural Similarity
more info
 
lipid storage IEA
Inferred from Electronic Annotation
more info
 
lipid storage ISO
Inferred from Sequence Orthology
more info
 
mitochondrion localization IEA
Inferred from Electronic Annotation
more info
 
mitochondrion localization ISO
Inferred from Sequence Orthology
more info
 
negative regulation of fatty acid beta-oxidation ISO
Inferred from Sequence Orthology
more info
 
negative regulation of fatty acid beta-oxidation ISS
Inferred from Sequence or Structural Similarity
more info
 
negative regulation of lipase activity ISO
Inferred from Sequence Orthology
more info
 
negative regulation of lipase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
negative regulation of lipid catabolic process ISO
Inferred from Sequence Orthology
more info
 
negative regulation of peroxisome proliferator activated receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
negative regulation of peroxisome proliferator activated receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
negative regulation of reactive oxygen species metabolic process ISO
Inferred from Sequence Orthology
more info
 
negative regulation of reactive oxygen species metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
negative regulation of triglyceride catabolic process ISO
Inferred from Sequence Orthology
more info
 
negative regulation of triglyceride catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
positive regulation of fatty acid beta-oxidation IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of fatty acid beta-oxidation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of lipase activity IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of lipid storage IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of sequestering of triglyceride IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of sequestering of triglyceride ISO
Inferred from Sequence Orthology
more info
 
positive regulation of triglyceride biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
positive regulation of triglyceride biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
cytosol IEA
Inferred from Electronic Annotation
more info
 
cytosol ISO
Inferred from Sequence Orthology
more info
 
lipid particle IDA
Inferred from Direct Assay
more info
PubMed 
lipid particle ISO
Inferred from Sequence Orthology
more info
 
colocalizes_with lipid particle ISO
Inferred from Sequence Orthology
more info
 
colocalizes_with lipid particle ISS
Inferred from Sequence or Structural Similarity
more info
 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
NOT colocalizes_with mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
perilipin-5
Names
perilipin-5
lipid storage droplet protein 5

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134637.1NP_001128109.1  perilipin-5

    See proteins identical to NP_001128109.1

    Status: PROVISIONAL

    Source sequence(s)
    CH474092
    UniProtKB/Swiss-Prot
    M0R7Z9
    Related
    ENSRNOP00000065588, ENSRNOT00000073930
    Conserved Domains (1) summary
    pfam03036
    Location:33396
    Perilipin; Perilipin family

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005108.4 Reference Rnor_6.0 Primary Assembly

    Range
    10956013..10961782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008766770.1XP_008764992.1  

    Conserved Domains (1) summary
    pfam03036
    Location:33384
    Perilipin; Perilipin family

Alternate Rn_Celera

Genomic

  1. AC_000077.1 Alternate Rn_Celera

    Range
    7561527..7567886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)