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Mnat1 menage a trois 1 [ Mus musculus (house mouse) ]

Gene ID: 17420, updated on 20-Dec-2014
Official Symbol
Mnat1provided by MGI
Official Full Name
menage a trois 1provided by MGI
Primary source
MGI:MGI:106207
See related
Ensembl:ENSMUSG00000021103; Vega:OTTMUSG00000047017
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
P36; MAT1; E130115E11Rik
See Mnat1 in Epigenomics, MapViewer
Location:
12 C3; 12
Exon count:
8
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 12 NC_000078.6 (73123717..73273988)

Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene sine oculis-related homeobox 1 Neighboring gene sine oculis-related homeobox 4 Neighboring gene cytochrome c oxidase subunit 7A2, mitochondrial-like Neighboring gene solute carrier family 38, member 6 Neighboring gene TRM5 tRNA methyltransferase 5

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
contributes_to DNA-dependent ATPase activity ISO
Inferred from Sequence Orthology
more info
 
contributes_to RNA polymerase II carboxy-terminal domain kinase activity ISO
Inferred from Sequence Orthology
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
protein N-terminus binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
ATP catabolic process ISO
Inferred from Sequence Orthology
more info
 
DNA repair IBA
Inferred from Biological aspect of Ancestor
more info
 
G1/S transition of mitotic cell cycle ISO
Inferred from Sequence Orthology
more info
 
adult heart development IMP
Inferred from Mutant Phenotype
more info
PubMed 
cell cycle IEA
Inferred from Electronic Annotation
more info
 
negative regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
positive regulation of smooth muscle cell proliferation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
regulation of cyclin-dependent protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
regulation of transcription from RNA polymerase II promoter IBA
Inferred from Biological aspect of Ancestor
more info
 
regulation of transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
regulation of transcription, DNA-templated IMP
Inferred from Mutant Phenotype
more info
PubMed 
response to calcium ion IMP
Inferred from Mutant Phenotype
more info
PubMed 
transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
ventricular system development IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
holo TFIIH complex IBA
Inferred from Biological aspect of Ancestor
more info
 
holo TFIIH complex ISO
Inferred from Sequence Orthology
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
CDK-activating kinase assembly factor MAT1
Names
CDK-activating kinase assembly factor MAT1
p35
RING finger protein MAT1
CDK7/cyclin H assembly factor
CDK7/cyclin-H assembly factor

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008612.2NP_032638.2  CDK-activating kinase assembly factor MAT1

    See proteins identical to NP_032638.2

    Status: VALIDATED

    Source sequence(s)
    AK155859, AK157721
    Consensus CDS
    CCDS49087.1
    UniProtKB/Swiss-Prot
    P51949
    Related
    ENSMUSP00000021523, OTTMUSP00000067003, ENSMUST00000021523, OTTMUST00000121788
    Conserved Domains (3) summary
    pfam06391
    Location:53252
    MAT1; CDK-activating kinase assembly factor MAT1
    TIGR00570
    Location:1308
    cdk7; CDK-activating kinase assembly factor MAT1
    cd00162
    Location:653
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000078.6 

    Range
    73123717..73273988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006515526.1XP_006515589.1  

    Conserved Domains (1) summary
    cl19113
    Location:1131
    ApoLp-III_like; Apolipophorin-III and similar insect proteins

Alternate Mm_Celera

Genomic

  1. AC_000034.1 

    Range
    74235147..74385303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)