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TRIM5 tripartite motif containing 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 574288, updated on 6-Jul-2014
Gene symbol
TRIM5
Gene description
tripartite motif containing 5
See related
Ensembl:ENSMMUG00000000335
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Annotation information
Annotation category: partial on reference assembly
See TRIM5 in MapViewer
Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
Build 1.2 current Mmul_051212 (GCF_000002255.3) 14 NC_007871.1 (67647548..67675035)

Chromosome 14 - NC_007871.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 52H1-like Neighboring gene tripartite motif containing 22 Neighboring gene tripartite motif containing 6 Neighboring gene olfactory receptor 52B6-like Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Preferred Names
tripartite motif-containing protein 5
Names
tripartite motif-containing protein 5
TRIM5alpha
tripartite motif-containing 5
tripartite motif-containing protein 5 isoform alpha
NP_001028082.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001032910.1NP_001028082.1  tripartite motif-containing protein 5

    See proteins identical to NP_001028082.1

    Status: PROVISIONAL

    Source sequence(s)
    AY523632
    UniProtKB/Swiss-Prot
    Q0PF16
    Related
    ENSMMUP00000000454, ENSMMUT00000000490
    Conserved Domains (5) summary
    cd00021
    Location:95133
    Blast Score: 121
    BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
    cd00162
    Location:1460
    Blast Score: 132
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably ...
    cd12900
    Location:299493
    Blast Score: 617
    SPRY_PRY_Btn_TRIMs; PRY/SPRY domain in butyrophilins and butyrophilins-like proteins, pyrin, as well as tripartite motif-containing proteins (TRIM4, 5, 6, 11, 21, 22, 27, 30, 34, 38, 58, 60, 68, 75)
    pfam12325
    Location:133177
    Blast Score: 94
    TMF_TATA_bd; TATA element modulatory factor 1 TATA binding
    cl19113
    Location:132239
    Blast Score: 92
    ApoLp-III_like; Apolipophorin-III and similar insect proteins

RefSeqs of Annotated Genomes: Build 1.2

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly (based on Mmul_051212)

Genomic

  1. NC_007871.1 

    Range
    67647548..67675035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)