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    LHB1B2 photosystem II light harvesting complex protein B1B2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818005, updated on 7-Feb-2016
    Gene symbol
    LHB1B2
    Gene description
    photosystem II light harvesting complex protein B1B2
    Primary source
    TAIR:AT2G34420
    Locus tag
    AT2G34420
    Gene type
    protein coding
    RNA name
    photosystem II light harvesting complex protein B1B2
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13P17.32; LHB1B2; LHCB1.5; PHOTOSYSTEM II LIGHT HARVESTING COMPLEX GENE 1.5; photosystem II light harvesting complex gene B1B2
    Summary
    Photosystem II type I chlorophyll a/b-binding protein
    See LHB1B2 in MapViewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (14522524..14523568, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene putative adipose-regulatory protein (Seipin) Neighboring gene aquaporin NIP2-1 Neighboring gene pentatricopeptide repeat-containing protein Neighboring gene protein REDUCED WALL ACETYLATION 3 Neighboring gene light-harvesting chlorophyll protein complex II subunit B1 Neighboring gene protein agamous-like 29

    Products Interactant Other Gene Complex Source Pubs Description
    NM_128994.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    chlorophyll binding IEA
    Inferred from Electronic Annotation
    more info
     
    chlorophyll binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    chlorophyll binding TAS
    Traceable Author Statement
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    photosynthesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    photosynthesis, light harvesting IEA
    Inferred from Electronic Annotation
    more info
     
    photosynthesis, light harvesting in photosystem II TAS
    Traceable Author Statement
    more info
     
    protein-chromophore linkage IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    NOT Golgi apparatus RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    chloroplast IDA
    Inferred from Direct Assay
    more info
    PubMed 
    chloroplast ISM
    Inferred from Sequence Model
    more info
     
    chloroplast thylakoid IDA
    Inferred from Direct Assay
    more info
    PubMed 
    chloroplast thylakoid membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    light-harvesting complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    photosystem I IEA
    Inferred from Electronic Annotation
    more info
     
    photosystem II IEA
    Inferred from Electronic Annotation
    more info
     
    plastoglobule IDA
    Inferred from Direct Assay
    more info
    PubMed 
    thylakoid IDA
    Inferred from Direct Assay
    more info
    PubMed 
    thylakoid membrane TAS
    Traceable Author Statement
    more info
     
    Names
    photosystem II light harvesting complex protein B1B2
    NP_565786.1
    • photosystem II light harvesting complex gene B1B2 (LHB1B2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, guard cell, juvenile leaf, cultured cell, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1); Has 2425 Blast hits to 2343 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2093; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink).

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14522524..14523568 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128994.3NP_565786.1  photosystem II light harvesting complex protein B1B2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565786.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q39141
      Conserved Domains (2) summary
      PLN00048
      Location:3253
      PLN00048; photosystem I light harvesting chlorophyll a/b binding protein 3; Provisional
      PLN00025
      Location:5265
      PLN00025; photosystem II light harvesting chlorophyll a/b binding protein; Provisional