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Cacng2 calcium channel, voltage-dependent, gamma subunit 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 84347, updated on 1-Feb-2015
Official Symbol
Cacng2provided by RGD
Official Full Name
calcium channel, voltage-dependent, gamma subunit 2provided by RGD
Primary source
RGD:71095
See related
Ensembl:ENSRNOG00000006226
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Also known as
Ipr328
Summary
subunit of voltage-dependent calcium channel; involved in influencing channel properties [RGD, Feb 2006]
Orthologs
See Cacng2 in MapViewer
Location:
7q33-q34
Exon count:
4
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (119229268..119352033, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 7 NC_005106.3 (119221311..119344620, complement)

Chromosome 7 - NC_005106.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102553765 Neighboring gene eukaryotic translation initiation factor 3, subunit D Neighboring gene uncharacterized LOC102554213 Neighboring gene intraflagellar transport 27

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
calcium channel regulator activity NAS
Non-traceable Author Statement
more info
PubMed 
ionotropic glutamate receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
voltage-gated calcium channel activity ISO
Inferred from Sequence Orthology
more info
 
voltage-gated calcium channel activity TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
calcium ion transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
membrane depolarization IEA
Inferred from Electronic Annotation
more info
 
membrane depolarization ISO
Inferred from Sequence Orthology
more info
 
membrane hyperpolarization IEA
Inferred from Electronic Annotation
more info
 
membrane hyperpolarization ISO
Inferred from Sequence Orthology
more info
 
neurological system process ISO
Inferred from Sequence Orthology
more info
 
neuromuscular junction development IEA
Inferred from Electronic Annotation
more info
 
neuromuscular junction development ISO
Inferred from Sequence Orthology
more info
 
regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
regulation of ion transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
regulation of membrane potential ISO
Inferred from Sequence Orthology
more info
 
transmission of nerve impulse IEA
Inferred from Electronic Annotation
more info
 
transmission of nerve impulse ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
voltage-dependent calcium channel gamma-2 subunit
Names
voltage-dependent calcium channel gamma-2 subunit
TARP gamma-2
neuronal voltage-gated calcium channel gamma-2 subunit
transmembrane AMPAR regulatory protein gamma-2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_053351.1NP_445803.1  voltage-dependent calcium channel gamma-2 subunit

    See proteins identical to NP_445803.1

    Status: PROVISIONAL

    Source sequence(s)
    AF118818
    UniProtKB/TrEMBL
    Q99PR9
    Related
    ENSRNOP00000008414, ENSRNOT00000008414
    Conserved Domains (1) summary
    pfam00822
    Location:6197
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005106.4 Reference Rnor_6.0 Primary Assembly

    Range
    119229268..119352033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Rn_Celera

Genomic

  1. AC_000075.1 Alternate Rn_Celera

    Range
    105915114..106037137
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)