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Nrgn neurogranin [ Rattus norvegicus (Norway rat) ]

Gene ID: 64356, updated on 8-Feb-2015
Official Symbol
Nrgnprovided by RGD
Official Full Name
neurograninprovided by RGD
Primary source
RGD:61833
See related
Ensembl:ENSRNOG00000010688
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Also known as
RC3
Summary
neuron specific protein kinase C substrate [RGD, Feb 2006]
Orthologs
See Nrgn in MapViewer
Location:
8q21
Exon count:
4
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (40015049..40023193, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 8 NC_005107.3 (40015873..40024017, complement)

Chromosome 8 - NC_005107.4Genomic Context describing neighboring genes Neighboring gene endothelial cell adhesion molecule Neighboring gene V-set and immunoglobulin domain containing 2 Neighboring gene uncharacterized LOC103693043 Neighboring gene sperm autoantigenic protein 17

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
calmodulin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
calmodulin binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
nervous system development IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
cell junction IEA
Inferred from Electronic Annotation
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
dendritic spine IEA
Inferred from Electronic Annotation
more info
 
intracellular IBA
Inferred from Biological aspect of Ancestor
more info
 
synapse IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
neurogranin
Names
neurogranin
neurogranin (protein kinase C substrate, RC3)
ng
protein kinase C substrate 7.5 kDa protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_024140.2NP_077054.1  neurogranin

    See proteins identical to NP_077054.1

    Status: PROVISIONAL

    Source sequence(s)
    L09119
    UniProtKB/Swiss-Prot
    Q04940
    Related
    ENSRNOP00000014404, ENSRNOT00000014404
    Conserved Domains (1) summary
    smart00015
    Location:3247
    IQ; Calmodulin-binding motif

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005107.4 Reference Rnor_6.0 Primary Assembly

    Range
    40015049..40023193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Rn_Celera

Genomic

  1. AC_000076.1 Alternate Rn_Celera

    Range
    37191658..37199870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)