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    Chat choline acetyltransferase [ Mus musculus (house mouse) ]

    Gene ID: 12647, updated on 28-Jul-2015
    Official Symbol
    Chatprovided by MGI
    Official Full Name
    choline acetyltransferaseprovided by MGI
    Primary source
    MGI:MGI:88392
    See related
    Ensembl:ENSMUSG00000021919
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    B230380D24Rik
    Orthologs
    See Chat in Epigenomics, MapViewer
    Location:
    14 B; 14 19.4 cM
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    105 current GRCm38.p3 (GCF_000001635.23) 14 NC_000080.6 (32408203..32465909, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (33221389..33279095, complement)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene oxoglutarate dehydrogenase-like Neighboring gene predicted gene, 41128 Neighboring gene RIKEN cDNA 1700024G13 gene Neighboring gene solute carrier family 18 (vesicular monoamine), member 3 Neighboring gene excision repair cross-complementing rodent repair deficiency, complementation group 6 Neighboring gene paired related homeobox protein-like 1

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    choline O-acetyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    choline O-acetyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    choline binding ISO
    Inferred from Sequence Orthology
    more info
     
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    transferase activity, transferring acyl groups IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acetylcholine biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    adult walking behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    dendrite development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    establishment of synaptic specificity at neuromuscular junction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    memory ISO
    Inferred from Sequence Orthology
    more info
     
    muscle organ development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuromuscular synaptic transmission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuron differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neurotransmitter biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    rhythmic behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    rhythmic excitation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    synaptic transmission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    axon IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    neuron projection IDA
    Inferred from Direct Assay
    more info
    PubMed 
    neuron projection ISO
    Inferred from Sequence Orthology
    more info
     
    neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    choline O-acetyltransferase
    Names
    CHOACTase
    choline acetylase
    NP_034021.1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009891.2NP_034021.1  choline O-acetyltransferase

      See identical proteins and their annotated locations for NP_034021.1

      Status: PROVISIONAL

      Source sequence(s)
      AK046406
      Consensus CDS
      CCDS26920.1
      UniProtKB/TrEMBL
      Q8BQV2
      Related
      ENSMUSP00000070865, ENSMUST00000070125
      Conserved Domains (1) summary
      pfam00755
      Location:23613
      Carn_acyltransf; Choline/Carnitine o-acyltransferase

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p3 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p3 C57BL/6J

      Range
      32408203..32465909
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Mm_Celera

    Genomic

    1. AC_000036.1 Alternate Mm_Celera

      Range
      28665793..28723609
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)