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Chat choline acetyltransferase [ Mus musculus (house mouse) ]

Gene ID: 12647, updated on 8-Jul-2014
Official Symbol
Chatprovided by MGI
Official Full Name
choline acetyltransferaseprovided by MGI
Primary source
MGI:88392
See related
Ensembl:ENSMUSG00000021919
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
B230380D24Rik
See Chat in Epigenomics, MapViewer
Location:
14 B; 14 19.4 cM
Exon count :
16
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 14 NC_000080.6 (32408203..32465909, complement)

Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene oxoglutarate dehydrogenase-like Neighboring gene RIKEN cDNA 1700024G13 gene Neighboring gene solute carrier family 18 (vesicular monoamine), member 3 Neighboring gene excision repair cross-complementing rodent repair deficiency, complementation group 6 Neighboring gene paired related homeobox protein-like 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
choline O-acetyltransferase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
choline O-acetyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
choline binding ISO
Inferred from Sequence Orthology
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring acyl groups IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acetylcholine biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
adult walking behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
dendrite development IMP
Inferred from Mutant Phenotype
more info
PubMed 
establishment of synaptic specificity at neuromuscular junction IMP
Inferred from Mutant Phenotype
more info
PubMed 
memory ISO
Inferred from Sequence Orthology
more info
 
muscle organ development IMP
Inferred from Mutant Phenotype
more info
PubMed 
neuromuscular synaptic transmission IMP
Inferred from Mutant Phenotype
more info
PubMed 
neuron differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
neurotransmitter biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
rhythmic behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
rhythmic excitation IMP
Inferred from Mutant Phenotype
more info
PubMed 
synaptic transmission IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
axon IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
neuron projection IDA
Inferred from Direct Assay
more info
PubMed 
neuron projection ISO
Inferred from Sequence Orthology
more info
 
neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
choline O-acetyltransferase
Names
choline O-acetyltransferase
CHOACTase
choline acetylase
NP_034021.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009891.2NP_034021.1  choline O-acetyltransferase

    See proteins identical to NP_034021.1

    Status: PROVISIONAL

    Source sequence(s)
    AK046406
    Consensus CDS
    CCDS26920.1
    UniProtKB/TrEMBL
    Q8BQV2
    Related
    ENSMUSP00000070865, ENSMUST00000070125
    Conserved Domains (1) summary
    pfam00755
    Location:23613
    Blast Score: 2186
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000080.6 

    Range
    32408203..32465909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000036.1 

    Range
    28665793..28723609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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