Format

Send to:

Choose Destination

Links from PubMed

    • Showing Current items.

    Esrra estrogen related receptor, alpha [ Mus musculus (house mouse) ]

    Gene ID: 26379, updated on 3-Jul-2016
    Official Symbol
    Esrraprovided by MGI
    Official Full Name
    estrogen related receptor, alphaprovided by MGI
    Primary source
    MGI:MGI:1346831
    See related
    Ensembl:ENSMUSG00000024955 Vega:OTTMUSG00000023201
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Err1; Nr3b1; Estrra; ERRalpha
    Orthologs
    Location:
    19 A; 19 5.08 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 19 NC_000085.6 (6910977..6922048, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (6985467..6996298, complement)

    Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 88B Neighboring gene peroxiredoxin 5 Neighboring gene tRNA methyltransferase 11-2 Neighboring gene microRNA 6990 Neighboring gene uncharacterized LOC108168407 Neighboring gene testis expressed 40 Neighboring gene potassium channel, subfamily K, member 4

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    steroid hormone receptor ERR1
    Names
    ERR-alpha
    Steroid hormone receptor ERR1 (Estrogen-related receptor, alpha) (ERR-alpha) (Estrogen receptor-like 1)
    estrogen receptor related 1
    estrogen receptor-like 1
    estrogen-related receptor alpha
    nuclear receptor subfamily 3 group B member 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007953.2NP_031979.2  steroid hormone receptor ERR1

      See identical proteins and their annotated locations for NP_031979.2

      Status: VALIDATED

      Source sequence(s)
      AC120557, BC052930, CO425338, CX208655
      Consensus CDS
      CCDS29509.1
      UniProtKB/Swiss-Prot
      O08580
      Related
      ENSMUSP00000025906, OTTMUSP00000026942, ENSMUST00000025906, OTTMUST00000056137
      Conserved Domains (2) summary
      cd06946
      Location:196419
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:73168
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000085.6 Reference GRCm38.p4 C57BL/6J

      Range
      6910977..6922048 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006527110.3XP_006527173.1  

      Conserved Domains (2) summary
      cd06946
      Location:273496
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:150245
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers
    2. XM_006527111.2XP_006527174.1  

      Conserved Domains (2) summary
      cd06946
      Location:225448
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cl02596
      Location:137197
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
    3. XM_017318209.1XP_017173698.1  

    4. XM_017318208.1XP_017173697.1