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MUD2 Mud2p [ Saccharomyces cerevisiae S288c ]

Gene ID: 853788, updated on 7-Sep-2014
Gene symbol
MUD2
Gene description
Mud2p
Primary source
SGD:S000001557
Locus tag
YKL074C
Gene type
protein coding
RNA name
Mud2p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See MUD2 in MapViewer
Location:
chromosome: XI
Exon count:
1
Sequence:
Chromosome: XI; NC_001143.9 (294610..296193, complement)

Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Hsp70 family chaperone LHS1 Neighboring gene Stb6p

  • Spliceosome, organism-specific biosystem (from KEGG)
    Spliceosome, organism-specific biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
  • Spliceosome, conserved biosystem (from KEGG)
    Spliceosome, conserved biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
mRNA binding IDA
Inferred from Direct Assay
more info
 
nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
pre-mRNA branch point binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
RNA splicing IEA
Inferred from Electronic Annotation
more info
 
mRNA branch site recognition IGI
Inferred from Genetic Interaction
more info
PubMed 
mRNA branch site recognition IMP
Inferred from Mutant Phenotype
more info
PubMed 
mRNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
commitment complex IDA
Inferred from Direct Assay
more info
PubMed 
commitment complex IMP
Inferred from Mutant Phenotype
more info
PubMed 
Names
Mud2p
NP_012849.1
  • Protein involved in early pre-mRNA splicing; component of the pre-mRNA-U1 snRNP complex, the commitment complex; interacts with Msl5p/BBP splicing factor and Sub2p; similar to metazoan splicing factor U2AF65

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001143.9 

    Range
    294610..296193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179640.1NP_012849.1  Mud2p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_012849.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P36084
    Conserved Domains (1) summary
    cd12232
    Location:436511
    Blast Score: 157
    RRM3_U2AF65; RNA recognition motif 3 found in U2 large nuclear ribonucleoprotein auxiliary factor U2AF 65 kDa subunit (U2AF65) and similar proteins